Example #1
0
        public void CreateFromFileTest()
        {
            Assert.DoesNotThrow(code: () => { _dataset = new BasicTextDataset(textFilePath: "small-test.txt"); },
                                message: "Dataset failed to initialize from file.");
            Assert.Throws <IOException>(code: () =>
            {
                _dataset = new BasicTextDataset(textFilePath: "wrong-filepath.txt");
            },
                                        message: "Dataset has been initialized using wrong file path.");

            var coordinates = _dataset.SpatialCoordinates;
            var enumerator  = coordinates.GetEnumerator();

            enumerator.MoveNext();
            var sc = enumerator.Current;

            Assert.AreEqual(expected: 1,
                            actual: sc.X,
                            message: "Spatial coordinates differ");
            Assert.AreEqual(expected: 1,
                            actual: sc.Y,
                            message: "Spatial coordinates differ");
            Assert.AreEqual(expected: 0,
                            actual: sc.Z,
                            message: "Spatial coordinates differ");

            enumerator.MoveNext();
            sc = enumerator.Current;
            Assert.AreEqual(expected: 2,
                            actual: sc.X,
                            message: "Spatial coordinates differ in second spectrum");
            Assert.AreEqual(expected: 1,
                            actual: sc.Y,
                            message: "Spatial coordinates differ in second spectrum");
            Assert.AreEqual(expected: 0,
                            actual: sc.Z,
                            message: "Spatial coordinates differ in second spectrum");

            Assert.AreEqual(expected: _dataset.GetRawMzArray(),
                            actual: new[] { 899.99, 902.58, 912.04 },
                            message: "The m/zs differ");
            Assert.AreEqual(expected: _dataset.GetRawIntensityArray(spectrumIdx: 0),
                            actual: new[] { 12.0, 20.0, 0.0 },
                            message: "The intensities of first spectrum differs");
        }