private void OnCohortCreatedSuccessfully(IPipelineRunner runner, ICohortCreationRequest request)
{
if (request.CohortCreatedIfAny != null)
{
Publish(request.CohortCreatedIfAny);
}
}
protected IPipelineRunner GetConfigureAndExecuteControl(ICohortCreationRequest request, string description)
{
var catalogueRepository = BasicActivator.RepositoryLocator.CatalogueRepository;
var pipelineRunner = BasicActivator.GetPipelineRunner(request, Pipeline);
pipelineRunner.PipelineExecutionFinishedsuccessfully += (o, args) => OnCohortCreatedSuccessfully(pipelineRunner, request);
//add in the logging server
var loggingServer = catalogueRepository.GetServerDefaults().GetDefaultFor(PermissableDefaults.LiveLoggingServer_ID);
if (loggingServer != null)
{
var logManager = new LogManager(loggingServer);
logManager.CreateNewLoggingTaskIfNotExists(ExtractableCohort.CohortLoggingTask);
//create a db listener
var toDbListener = new ToLoggingDatabaseDataLoadEventListener(this, logManager, ExtractableCohort.CohortLoggingTask, description);
//make all messages go to both the db and the UI
pipelineRunner.SetAdditionalProgressListener(toDbListener);
//after executing the pipeline finalise the db listener table info records
pipelineRunner.PipelineExecutionFinishedsuccessfully += (s, e) => toDbListener.FinalizeTableLoadInfos();
}
return(pipelineRunner);
}
/// <inheritdoc/>
public void Initialize(ICohortCreationRequest request)
{
if (!request.Project.ProjectNumber.HasValue)
{
throw new ProjectNumberException("Project " + request.Project + " must have a ProjectNumber");
}
_request = request;
_projectNumber = request.Project.ProjectNumber.Value;
}
/// <summary>
/// Initialises <see cref="Request"/>
/// </summary>
/// <param name="value"></param>
/// <param name="listener"></param>
public virtual void PreInitialize(ICohortCreationRequest value, IDataLoadEventListener listener)
{
Request = value;
var target = Request.NewCohortDefinition.LocationOfCohort;
var syntax = target.GetQuerySyntaxHelper();
_privateIdentifier = syntax.GetRuntimeName(target.PrivateIdentifierField);
_releaseIdentifier = syntax.GetRuntimeName(target.ReleaseIdentifierField);
_fk = syntax.GetRuntimeName(Request.NewCohortDefinition.LocationOfCohort.DefinitionTableForeignKeyField);
listener.OnNotify(this, new NotifyEventArgs(ProgressEventType.Information, "CohortCreationRequest spotted, we will look for columns " + _privateIdentifier + " and " + _releaseIdentifier + " (both of which must be in the pipeline before we will allow the cohort to be submitted)"));
listener.OnNotify(this, new NotifyEventArgs(ProgressEventType.Information, "id column in table " + Request.NewCohortDefinition.LocationOfCohort.TableName + " is " + Request.NewCohortDefinition.LocationOfCohort.DefinitionTableForeignKeyField));
}
/// <inheritdoc/>
public void Initialize(ICohortCreationRequest request)
{
if (request.Project != null)
{
if (!request.Project.ProjectNumber.HasValue)
{
throw new ProjectNumberException("Project " + request.Project + " must have a ProjectNumber");
}
}
else
{
if ((request.NewCohortDefinition?.ProjectNumber ?? 0) == 0)
{
throw new ProjectNumberException("No Project was specified and NewCohortDefinition had no explicit project number");
}
}
_request = request;
_projectNumber = request.Project?.ProjectNumber.Value ?? request.NewCohortDefinition?.ProjectNumber ?? 0;
}
public void Initialize(ICohortCreationRequest request)
{
}
