public CPPNNEATGenome(ICPPNNEATGA parentGA, CPPNNEATGenome <PType> parent, CPPNNEATGenome <PType> partner)
: this(parentGA)
{
var differences = new DifferenceAnalysis(parent.GeneCollection, partner.GeneCollection);
var disjointAndExcessSource = differences.FirstCollection;
if (partner.Score > parent.Score)
{
disjointAndExcessSource = differences.SecondCollection;
}
else if (partner.Score == parent.Score)
{
disjointAndExcessSource = (MathExtensions.RandomNumber() <= 0.5) ? differences.FirstCollection :
differences.SecondCollection;
}
Func <CPPNNEATLinkGene, CPPNNEATLinkGene, Complex> weightSelector = null;
if (MathExtensions.RandomNumber() <= parentGA.MateByAveragingRate)
{
weightSelector = (first, second) => (first.Weight + second.Weight) / 2;
}
else
{
weightSelector = (first, second) => (MathExtensions.RandomNumber() <= 0.5) ? first.Weight : second.Weight;
}
foreach (var match in differences.Matches)
{
var geneToCopy = match.FirstCollection;
var newGene = geneToCopy.Copy();
newGene.Enabled = true;
newGene.Weight = weightSelector(match.FirstCollection, match.SecondCollection);
GeneCollection.TryAddLinkGene(newGene);
if ((!match.FirstCollection.Enabled || !match.SecondCollection.Enabled) &&
MathExtensions.RandomNumber() <= parentGA.DisableGeneRate)
{
GeneCollection.DisableLinkGene(newGene.InnovationNumber);
}
}
foreach (var linkGene in disjointAndExcessSource
.Disjoint.Union(disjointAndExcessSource.Excess))
{
GeneCollection.TryAddLinkGene(linkGene.Copy());
}
}
public CPPNNEATGenome(ICPPNNEATGA parent) : base(parent)
{
this.GeneCollection = new CPPNNEATGeneCollection(this);
}