public static ExporterBase <IsosResult> CreateMSFeatureExporter(Globals.ExporterType exporterType, Globals.MSFileType msFileType, string outputFileName)
{
Check.Assert(!string.IsNullOrEmpty(outputFileName), "MSFeatureExporterFactory cannot work. OutputFileName is empty - which is bad.");
ExporterBase <IsosResult> msFeatureExporter;
switch (exporterType)
{
case Globals.ExporterType.Text:
//IMS and UIMF filetypes have their own special export formats. All others will use a standard format.
switch (msFileType)
{
case Globals.MSFileType.PNNL_IMS:
msFeatureExporter = new MSFeatureToTextFileExporterIMF(outputFileName);
break;
case Globals.MSFileType.PNNL_UIMF:
msFeatureExporter = new MSFeatureToTextFileExporterUIMF(outputFileName);
break;
default:
msFeatureExporter = new MSFeatureToTextFileExporterBasic(outputFileName);
break;
}
break;
case Globals.ExporterType.Sqlite:
switch (msFileType)
{
case Globals.MSFileType.PNNL_UIMF:
msFeatureExporter = new MSFeatureToSQLiteExporterUIMF(outputFileName);
break;
default:
msFeatureExporter = new MSFeatureToSQLiteExporterBasic(outputFileName);
break;
}
break;
default:
throw new NotImplementedException();
//break;
}
return(msFeatureExporter);
}
public static ExporterBase <ScanResult> CreateMSScanInfoExporterFactory(Globals.ExporterType exporterType,
Globals.MSFileType msFileType, string outputFileName)
{
Check.Assert(!string.IsNullOrEmpty(outputFileName), "MSScanInfoExporterFactory cannot work. OutputFileName is empty - which is bad.");
ExporterBase <ScanResult> msFeatureExporter;
switch (exporterType)
{
case Globals.ExporterType.Text:
switch (msFileType)
{
case Globals.MSFileType.PNNL_UIMF:
msFeatureExporter = new MSScanInfoToTextFileExporterUIMF(outputFileName);
break;
default:
msFeatureExporter = new MSScanInfoToTextFileExporterBasic(outputFileName);
break;
}
break;
case Globals.ExporterType.Sqlite:
switch (msFileType)
{
case Globals.MSFileType.PNNL_UIMF:
msFeatureExporter = new MSScanInfoToSQLiteExporterUIMF(outputFileName);
break;
default:
msFeatureExporter = new MSScanInfoToSQLiteExporterBasic(outputFileName);
break;
}
break;
default:
throw new NotImplementedException();
}
return(msFeatureExporter);
}
public static IPeakListExporter Create(Globals.ExporterType exporterType, Globals.MSFileType fileType, int triggerValue, string outputFileName)
{
IPeakListExporter exporter;
switch (exporterType)
{
case Globals.ExporterType.Text:
exporter = new PeakListTextExporter(fileType, triggerValue, outputFileName);
break;
case Globals.ExporterType.Sqlite:
exporter = new PeakListSQLiteExporter(triggerValue, outputFileName);
break;
default:
exporter = new PeakListTextExporter(fileType, triggerValue, outputFileName);
break;
}
return(exporter);
}
public static ScanResultExporter CreateScansExporter(Globals.MSFileType fileType, Globals.ExporterType exporterType, string outputFileName)
{
ScanResultExporter scansExporter;
switch (fileType)
{
case Globals.MSFileType.PNNL_UIMF:
switch (exporterType)
{
case Globals.ExporterType.Text:
scansExporter = new UIMFScanResult_TextFileExporter(outputFileName);
break;
case Globals.ExporterType.Sqlite:
scansExporter = new UIMFScanResult_SqliteExporter(outputFileName);
break;
default:
scansExporter = new UIMFScanResult_TextFileExporter(outputFileName);
break;
}
break;
default:
switch (exporterType)
{
case Globals.ExporterType.Text:
scansExporter = new BasicScanResult_TextFileExporter(outputFileName);
break;
case Globals.ExporterType.Sqlite:
scansExporter = new BasicScanResult_SqliteExporter(outputFileName);
break;
default:
scansExporter = new BasicScanResult_TextFileExporter(outputFileName);
break;
}
break;
}
return(scansExporter);
}
public static IsosResultExporter CreateIsosExporter(Globals.ResultType resultType, Globals.ExporterType exporterType, string outputFileName)
{
IsosResultExporter isosExporter;
switch (resultType)
{
case Globals.ResultType.BASIC_TRADITIONAL_RESULT:
switch (exporterType)
{
case Globals.ExporterType.Text:
isosExporter = new BasicIsosResultTextFileExporter(outputFileName, TriggerToExportValue);
break;
case Globals.ExporterType.Sqlite:
isosExporter = new BasicIsosResultSqliteExporter(outputFileName, TriggerToExportValue);
break;
default:
isosExporter = new BasicIsosResultTextFileExporter(outputFileName, TriggerToExportValue);
break;
}
break;
case Globals.ResultType.UIMF_TRADITIONAL_RESULT:
switch (exporterType)
{
case Globals.ExporterType.Text:
isosExporter = new UIMFIsosResultTextFileExporter(outputFileName, TriggerToExportValue);
break;
case Globals.ExporterType.Sqlite:
isosExporter = new UIMFIsosResultSqliteExporter(outputFileName, TriggerToExportValue);
break;
default:
isosExporter = new UIMFIsosResultTextFileExporter(outputFileName, TriggerToExportValue);
break;
}
break;
case Globals.ResultType.IMS_TRADITIONAL_RESULT:
switch (exporterType)
{
case Globals.ExporterType.Text:
isosExporter = new IMFIsosResult_TextFileExporter(outputFileName, TriggerToExportValue);
break;
case Globals.ExporterType.Sqlite:
throw new NotImplementedException();
default:
isosExporter = new IMFIsosResult_TextFileExporter(outputFileName, TriggerToExportValue);
break;
}
break;
case Globals.ResultType.O16O18_TRADITIONAL_RESULT:
switch (exporterType)
{
case Globals.ExporterType.Text:
isosExporter = new O16O18IsosResultTextFileExporter(outputFileName, TriggerToExportValue);
break;
case Globals.ExporterType.Sqlite:
throw new NotImplementedException();
default:
isosExporter = new IMFIsosResult_TextFileExporter(outputFileName, TriggerToExportValue);
break;
}
break;
case Globals.ResultType.BASIC_TARGETED_RESULT:
throw new ApplicationException("Cannot create IsosExporter for Targeted-type results");
case Globals.ResultType.O16O18_TARGETED_RESULT:
throw new ApplicationException("Cannot create IsosExporter for Targeted-type results");
case Globals.ResultType.N14N15_TARGETED_RESULT:
throw new ApplicationException("Cannot create IsosExporter for Targeted-type results");
case Globals.ResultType.DEUTERATED_TARGETED_RESULT:
throw new ApplicationException("Cannot create IsosExporter for Targeted-type results");
default:
throw new ApplicationException("Cannot create IsosExporter for this type of Result: " + resultType);
}
return(isosExporter);
}
