private object AddMarginalStatements(IExpression expr) { object decl = Recognizer.GetDeclaration(expr); if (!context.InputAttributes.Has <VariableToChannelInformation>(decl)) { VariableInformation vi = VariableInformation.GetVariableInformation(context, decl); vi.DefineAllIndexVars(context); IList <IStatement> stmts = Builder.StmtCollection(); VariableToChannelInformation vtci = new VariableToChannelInformation(); vtci.shareAllUses = true; Context.InputAttributes.Set(decl, vtci); CreateMarginalChannel(vi, vtci, stmts); IExpression marginalExpr = Builder.VarRefExpr(vtci.marginalChannel.decl); Type[] genArgs = new Type[] { expr.GetExpressionType() }; IExpression countExpr = Builder.LiteralExpr(0); IExpression variableFactorExpr; if (algorithm is GibbsSampling && ((GibbsSampling)algorithm).UseSideChannels) { CreateSamplesChannel(vi, vtci, stmts); CreateConditionalsChannel(vi, vtci, stmts); IExpression burnInExpr = Builder.LiteralExpr(0); IExpression thinExpr = Builder.LiteralExpr(1); IExpression samplesExpr = Builder.VarRefExpr(vtci.samplesChannel.decl); IExpression conditionalsExpr = Builder.VarRefExpr(vtci.conditionalsChannel.decl); Delegate d = new FuncOut3 <PlaceHolder, int, int, int, PlaceHolder, PlaceHolder, PlaceHolder, PlaceHolder[]>(Clone.ReplicateWithMarginalGibbs); variableFactorExpr = Builder.StaticGenericMethod(d, genArgs, expr, countExpr, burnInExpr, thinExpr, marginalExpr, samplesExpr, conditionalsExpr); } else { vtci.samplesChannel = vtci.marginalChannel; vtci.conditionalsChannel = vtci.marginalChannel; Delegate d = new FuncOut <PlaceHolder, int, PlaceHolder, PlaceHolder[]>(Clone.ReplicateWithMarginal); variableFactorExpr = Builder.StaticGenericMethod(d, genArgs, expr, countExpr, marginalExpr); } CreateUsesChannel(vi, 0, vtci, stmts); IExpression usesExpr = Builder.VarRefExpr(vtci.usageChannel.decl); vtci.usageChannel = null; stmts.Add(Builder.AssignStmt(usesExpr, variableFactorExpr)); context.OutputAttributes.Set(variableFactorExpr, new IsVariableFactor()); context.AddStatementsBeforeCurrent(stmts); } return(decl); }
/// <summary> /// Converts a variable declaration by creating definition, marginal and uses channel variables. /// </summary> protected override IExpression ConvertVariableDeclExpr(IVariableDeclarationExpression ivde) { IVariableDeclaration ivd = ivde.Variable; VariableInformation vi = VariableInformation.GetVariableInformation(context, ivd); // If the variable is deterministic, return bool isInferred = context.InputAttributes.Has <IsInferred>(ivd); if (!vi.IsStochastic) { return(ivde); } bool suppressVariableFactor = context.InputAttributes.Has <SuppressVariableFactor>(ivd); bool isDerived = context.InputAttributes.Has <DerivedVariable>(ivd); bool isStochastic = vi.IsStochastic; int useCount; ChannelAnalysisTransform.UsageInfo info; if (!analysis.usageInfo.TryGetValue(ivd, out info)) { useCount = 0; } else { useCount = info.NumberOfUsesOld; } if (!(algorithm is Algorithms.GibbsSampling) && isStochastic && !suppressVariableFactor && (useCount <= 1) && !isInferred && isDerived) { // this is optional suppressVariableFactor = true; context.InputAttributes.Set(ivd, new SuppressVariableFactor()); } context.InputAttributes.Remove <LoopContext>(ivd); context.InputAttributes.Set(ivd, new LoopContext(context)); // Create variable-to-channel information for the variable. VariableToChannelInformation vtci = new VariableToChannelInformation(); vtci.shareAllUses = (useCount <= 1); Context.InputAttributes.Set(ivd, vtci); // Create the definition channel vtci.defChannel = ChannelInfo.DefChannel(vi); vtci.defChannel.decl = ivd; // Always create a variable factor for a stochastic variable if (isInferred || (isStochastic && !suppressVariableFactor)) { vi.DefineAllIndexVars(context); IList <IStatement> stmts = Builder.StmtCollection(); // Create marginal channel CreateMarginalChannel(vi, vtci, stmts); if (algorithm is GibbsSampling && ((GibbsSampling)algorithm).UseSideChannels) { CreateSamplesChannel(vi, vtci, stmts); CreateConditionalsChannel(vi, vtci, stmts); } else { vtci.samplesChannel = vtci.marginalChannel; vtci.conditionalsChannel = vtci.marginalChannel; } if (isStochastic) { // Create uses channel CreateUsesChannel(vi, useCount, vtci, stmts); } //setAllGroupRoots(context, ivd, false); context.AddStatementsBeforeCurrent(stmts); // Append usageDepth indices to def/marginal/use expressions IExpression defExpr = Builder.VarRefExpr(ivd); IExpression marginalExpr = Builder.VarRefExpr(vtci.marginalChannel.decl); IExpression countExpr = Builder.LiteralExpr(useCount); // Add clone factor tying together all of the channels IMethodInvokeExpression variableFactorExpr; Type[] genArgs = new Type[] { vi.varType }; if (algorithm is GibbsSampling && ((GibbsSampling)algorithm).UseSideChannels) { GibbsSampling gs = (GibbsSampling)algorithm; IExpression burnInExpr = Builder.LiteralExpr(gs.BurnIn); IExpression thinExpr = Builder.LiteralExpr(gs.Thin); IExpression samplesExpr = Builder.VarRefExpr(vtci.samplesChannel.decl); IExpression conditionalsExpr = Builder.VarRefExpr(vtci.conditionalsChannel.decl); if (isDerived) { Delegate d = new FuncOut3 <PlaceHolder, int, int, int, PlaceHolder, PlaceHolder, PlaceHolder, PlaceHolder[]>(Clone.ReplicateWithMarginalGibbs); variableFactorExpr = Builder.StaticGenericMethod(d, genArgs, defExpr, countExpr, burnInExpr, thinExpr, marginalExpr, samplesExpr, conditionalsExpr); } else { Delegate d = new FuncOut3 <PlaceHolder, int, int, int, PlaceHolder, PlaceHolder, PlaceHolder, PlaceHolder[]>(Clone.UsesEqualDefGibbs); variableFactorExpr = Builder.StaticGenericMethod(d, genArgs, defExpr, countExpr, burnInExpr, thinExpr, marginalExpr, samplesExpr, conditionalsExpr); } } else { Delegate d; if (isDerived) { d = new FuncOut <PlaceHolder, int, PlaceHolder, PlaceHolder[]>(Clone.ReplicateWithMarginal <PlaceHolder>); } else { d = new FuncOut <PlaceHolder, int, PlaceHolder, PlaceHolder[]>(Clone.UsesEqualDef <PlaceHolder>); } variableFactorExpr = Builder.StaticGenericMethod(d, genArgs, defExpr, countExpr, marginalExpr); } if (isDerived) { context.OutputAttributes.Set(variableFactorExpr, new DerivedVariable()); // used by Gibbs } // Mark this as a pseudo-factor context.OutputAttributes.Set(variableFactorExpr, new IsVariableFactor()); if (useCount <= 1) { context.OutputAttributes.Set(variableFactorExpr, new DivideMessages(false)); } else { context.InputAttributes.CopyObjectAttributesTo <DivideMessages>(ivd, context.OutputAttributes, variableFactorExpr); } context.InputAttributes.CopyObjectAttributesTo <GivePriorityTo>(ivd, context.OutputAttributes, variableFactorExpr); if (vtci.usageChannel != null) { IExpression usageExpr = Builder.VarRefExpr(vtci.usageChannel.decl); IAssignExpression assignExpr = Builder.AssignExpr(usageExpr, variableFactorExpr); // Copy attributes across from input to output Context.InputAttributes.CopyObjectAttributesTo <Algorithm>(ivd, context.OutputAttributes, assignExpr); context.OutputAttributes.Remove <InitialiseTo>(ivd); if (vi.ArrayDepth == 0) { // Insert the UsesEqualDef statement after the declaration. // Note the variable will not have been defined yet. context.AddStatementAfterCurrent(Builder.ExprStatement(assignExpr)); } else { // For an array, the UsesEqualDef statement should be inserted after the array is allocated. // Store the statement for later use by ConvertArrayCreate. context.InputAttributes.Remove <LoopContext>(ivd); context.InputAttributes.Set(ivd, new LoopContext(context)); context.InputAttributes.Remove <Containers>(ivd); context.InputAttributes.Set(ivd, new Containers(context)); vtci.usesEqualDefsStatements = Builder.StmtCollection(); vtci.usesEqualDefsStatements.Add(Builder.ExprStatement(assignExpr)); } } } // These must be set after the above or they will be copied to the other channels if (isStochastic) { context.OutputAttributes.Set(ivd, vtci.defChannel); } if (!context.InputAttributes.Has <DescriptionAttribute>(vtci.defChannel.decl)) { context.OutputAttributes.Set(vtci.defChannel.decl, new DescriptionAttribute("definition of '" + ivd.Name + "'")); } return(ivde); }
/// <summary> /// Converts a variable declaration by creating definition, marginal and uses channel variables. /// </summary> protected override IExpression ConvertVariableDeclExpr(IVariableDeclarationExpression ivde) { IVariableDeclaration ivd = ivde.Variable; VariableInformation vi = VariableInformation.GetVariableInformation(context, ivd); // If the variable is deterministic, return if (!vi.IsStochastic) { ProcessConstant(ivd); context.OutputAttributes.Set(ivd, new DescriptionAttribute("The constant '" + ivd.Name + "'")); return(ivde); } bool suppressVariableFactor = context.InputAttributes.Has <SuppressVariableFactor>(ivd); bool isDerived = context.InputAttributes.Has <DerivedVariable>(ivd); bool isConstant = false; bool isInferred = context.InputAttributes.Has <IsInferred>(ivd); int useCount; ChannelAnalysisTransform.UsageInfo info; if (!analysis.usageInfo.TryGetValue(ivd, out info)) { useCount = 0; } else { useCount = info.NumberOfUsesOld; } if (!(algorithm is Algorithms.GibbsSampling) && !isConstant && !suppressVariableFactor && (useCount == 1) && !isInferred && isDerived) { // this is optional suppressVariableFactor = true; context.InputAttributes.Set(ivd, new SuppressVariableFactor()); } context.InputAttributes.Remove <LoopContext>(ivd); context.InputAttributes.Set(ivd, new LoopContext(context)); // Create variable-to-channel information for the variable. VariableToChannelInformation vtc = new VariableToChannelInformation(); vtc.shareAllUses = (useCount == 1); Context.InputAttributes.Set(ivd, vtc); // Ensure the marginal prototype is set. MarginalPrototype mpa = Context.InputAttributes.Get <MarginalPrototype>(ivd); try { vi.SetMarginalPrototypeFromAttribute(mpa); } catch (ArgumentException ex) { Error(ex.Message); } // Create the definition channel vtc.defChannel = ChannelInfo.DefChannel(vi); vtc.defChannel.decl = ivd; // Always create a variable factor for a stochastic variable if (!isConstant && !suppressVariableFactor) { vi.DefineAllIndexVars(context); IList <IStatement> stmts = Builder.StmtCollection(); // Create marginal channel vtc.marginalChannel = ChannelInfo.MarginalChannel(vi); vtc.marginalChannel.decl = vi.DeriveIndexedVariable(stmts, context, vi.Name + "_marginal"); context.InputAttributes.CopyObjectAttributesTo <InitialiseTo>(vi.declaration, context.OutputAttributes, vtc.marginalChannel.decl); context.OutputAttributes.Set(vtc.marginalChannel.decl, vtc.marginalChannel); context.OutputAttributes.Set(vtc.marginalChannel.decl, new DescriptionAttribute("marginal of '" + ivd.Name + "'")); SetMarginalPrototype(vtc.marginalChannel.decl); if (algorithm is GibbsSampling && ((GibbsSampling)algorithm).UseSideChannels) { Type marginalType = MessageTransform.GetDistributionType(vi.varType, vi.InnermostElementType, vi.marginalPrototypeExpression.GetExpressionType(), true); Type domainType = ivd.VariableType.DotNetType; vtc.samplesChannel = ChannelInfo.MarginalChannel(vi); vtc.samplesChannel.decl = vi.DeriveIndexedVariable(stmts, context, vi.Name + "_samples"); context.OutputAttributes.Remove <InitialiseTo>(vtc.samplesChannel.decl); context.OutputAttributes.Set(vtc.samplesChannel.decl, vtc.samplesChannel); context.OutputAttributes.Set(vtc.samplesChannel.decl, new DescriptionAttribute("samples of '" + ivd.Name + "'")); Type samplesType = typeof(List <>).MakeGenericType(domainType); IExpression samples_mpe = Builder.NewObject(samplesType); VariableInformation samples_vi = VariableInformation.GetVariableInformation(context, vtc.samplesChannel.decl); samples_vi.marginalPrototypeExpression = samples_mpe; vtc.conditionalsChannel = ChannelInfo.MarginalChannel(vi); vtc.conditionalsChannel.decl = vi.DeriveIndexedVariable(stmts, context, vi.Name + "_conditionals"); context.OutputAttributes.Remove <InitialiseTo>(vtc.conditionalsChannel.decl); context.OutputAttributes.Set(vtc.conditionalsChannel.decl, vtc.conditionalsChannel); context.OutputAttributes.Set(vtc.conditionalsChannel.decl, new DescriptionAttribute("conditionals of '" + ivd.Name + "'")); Type conditionalsType = typeof(List <>).MakeGenericType(marginalType); IExpression conditionals_mpe = Builder.NewObject(conditionalsType); VariableInformation conditionals_vi = VariableInformation.GetVariableInformation(context, vtc.conditionalsChannel.decl); conditionals_vi.marginalPrototypeExpression = conditionals_mpe; } else { vtc.samplesChannel = vtc.marginalChannel; vtc.conditionalsChannel = vtc.marginalChannel; } // Create uses channel vtc.usageChannel = ChannelInfo.UseChannel(vi); vtc.usageChannel.decl = vi.DeriveArrayVariable(stmts, context, vi.Name + "_uses", Builder.LiteralExpr(useCount), Builder.VarDecl("_ind", typeof(int)), useLiteralIndices: true); context.InputAttributes.CopyObjectAttributesTo <InitialiseTo>(vi.declaration, context.OutputAttributes, vtc.usageChannel.decl); context.OutputAttributes.Set(vtc.usageChannel.decl, vtc.usageChannel); context.OutputAttributes.Set(vtc.usageChannel.decl, new DescriptionAttribute("uses of '" + ivd.Name + "'")); SetMarginalPrototype(vtc.usageChannel.decl); //setAllGroupRoots(context, ivd, false); context.AddStatementsBeforeCurrent(stmts); // Append usageDepth indices to def/marginal/use expressions IExpression defExpr = Builder.VarRefExpr(ivd); IExpression marginalExpr = Builder.VarRefExpr(vtc.marginalChannel.decl); IExpression usageExpr = Builder.VarRefExpr(vtc.usageChannel.decl); IExpression countExpr = Builder.LiteralExpr(useCount); // Add clone factor tying together all of the channels IMethodInvokeExpression usesEqualDefExpression; Type[] genArgs = new Type[] { vi.varType }; if (algorithm is GibbsSampling && ((GibbsSampling)algorithm).UseSideChannels) { GibbsSampling gs = (GibbsSampling)algorithm; IExpression burnInExpr = Builder.LiteralExpr(gs.BurnIn); IExpression thinExpr = Builder.LiteralExpr(gs.Thin); IExpression samplesExpr = Builder.VarRefExpr(vtc.samplesChannel.decl); IExpression conditionalsExpr = Builder.VarRefExpr(vtc.conditionalsChannel.decl); if (isDerived) { Delegate d = new FuncOut3 <PlaceHolder, int, int, int, PlaceHolder, PlaceHolder, PlaceHolder, PlaceHolder[]>(Factor.ReplicateWithMarginalGibbs); usesEqualDefExpression = Builder.StaticGenericMethod(d, genArgs, defExpr, countExpr, burnInExpr, thinExpr, marginalExpr, samplesExpr, conditionalsExpr); } else { Delegate d = new FuncOut3 <PlaceHolder, int, int, int, PlaceHolder, PlaceHolder, PlaceHolder, PlaceHolder[]>(Factor.UsesEqualDefGibbs); usesEqualDefExpression = Builder.StaticGenericMethod(d, genArgs, defExpr, countExpr, burnInExpr, thinExpr, marginalExpr, samplesExpr, conditionalsExpr); } } else { Delegate d; if (isDerived) { d = new FuncOut <PlaceHolder, int, PlaceHolder, PlaceHolder[]>(Factor.ReplicateWithMarginal <PlaceHolder>); } else { d = new FuncOut <PlaceHolder, int, PlaceHolder, PlaceHolder[]>(Factor.UsesEqualDef <PlaceHolder>); } usesEqualDefExpression = Builder.StaticGenericMethod(d, genArgs, defExpr, countExpr, marginalExpr); } if (isDerived) { context.OutputAttributes.Set(usesEqualDefExpression, new DerivedVariable()); // used by Gibbs } // Mark this as a pseudo-factor context.OutputAttributes.Set(usesEqualDefExpression, new IsVariableFactor()); if (useCount == 1) { context.OutputAttributes.Set(usesEqualDefExpression, new DivideMessages(false)); } else { context.InputAttributes.CopyObjectAttributesTo <DivideMessages>(ivd, context.OutputAttributes, usesEqualDefExpression); } context.InputAttributes.CopyObjectAttributesTo <GivePriorityTo>(ivd, context.OutputAttributes, usesEqualDefExpression); IAssignExpression assignExpr = Builder.AssignExpr(usageExpr, usesEqualDefExpression); // Copy attributes across from input to output Context.InputAttributes.CopyObjectAttributesTo <Algorithm>(ivd, context.OutputAttributes, assignExpr); context.OutputAttributes.Remove <InitialiseTo>(ivd); if (vi.ArrayDepth == 0) { // Insert the UsesEqualDef statement after the declaration. // Note the variable will not have been defined yet. context.AddStatementAfterCurrent(Builder.ExprStatement(assignExpr)); } else { // For an array, the UsesEqualDef statement should be inserted after the array is allocated. // Store the statement for later use by ConvertArrayCreate. context.InputAttributes.Remove <LoopContext>(ivd); context.InputAttributes.Set(ivd, new LoopContext(context)); context.InputAttributes.Remove <Containers>(ivd); context.InputAttributes.Set(ivd, new Containers(context)); vtc.usesEqualDefsStatements = Builder.StmtCollection(); vtc.usesEqualDefsStatements.Add(Builder.ExprStatement(assignExpr)); } } // These must be set after the above or they will be copied to the other channels context.OutputAttributes.Set(ivd, vtc.defChannel); context.OutputAttributes.Set(vtc.defChannel.decl, new DescriptionAttribute("definition of '" + ivd.Name + "'")); return(ivde); }