private void LoadProject()
{
try
{
DialogResult dlg = dlgOpenProject.ShowDialog();
if (dlg != DialogResult.OK)
{
return;
}
SetText(dlgOpenProject);
string filename = dlgOpenProject.FileName;
try
{
OA = OPALArray.ReadFromFile(filename);
}
catch
{
MessageBox.Show("The file may be corrupted or not a valid PeSA project file.", Analyzer.ProgramName);
}
thresholdEntry.SetInitialValues(OA.GetPositiveThreshold(), OA.GetNegativeThreshold());
rbMaxValue.Checked = OA.NormMode == NormalizationMode.Max;
rbPerRowColumn.Checked = OA.NormMode != NormalizationMode.Max;
cbPermutationXAxis.Checked = PermutationXAxis;
cbYAxisTopToBottom.Checked = OA.PositionYAxisTopToBottom;
if (OA.QuantificationMatrix != null)
{
LoadQuantificationFromOPALArrayToGrid();
}
GridUtil.LoadNumericMatrixToGrid(dgNormalized, OA.NormalizedMatrix, 1, 1);
FillGridHeaders(dgNormalized);
bool gridOK = ColorGridsandDrawMotifs();//also creates/draws the motif
eNotes.Text = OA.Notes;
imageReference.Image = null;
try
{
Image img = FileUtil.Base64ToImage(OA.ImageStr);
imageReference.Image = img;
}
catch { }
DrawColorMatrix();
if (!gridOK)
{
MessageBox.Show("There is a problem in loading the file. It is highly recommended to re-run the analysis.", Analyzer.ProgramName);
}
}
catch
{
MessageBox.Show("There is a problem in loading the file. It is highly recommended to re-run the analysis.", Analyzer.ProgramName);
}
linkRun.Visible = true;
}
private void LoadProject()
{
try
{
DialogResult dlg = dlgOpenProject.ShowDialog();
if (dlg != DialogResult.OK)
{
return;
}
SetText(dlgOpenProject);
string filename = dlgOpenProject.FileName;
PA = PermutationArray.ReadFromFile(filename);
thresholdEntry.SetInitialValues(PA.GetPositiveThreshold(), PA.GetNegativeThreshold());
cbWildTypeXAxis.Checked = !PA.PermutationXAxis;
cbYAxisTopToBottom.Checked = PA.WildTypeYAxisTopToBottom;
colCount = PA.ColCount;
rowCount = PA.RowCount;
SetRowColumnCount();
rbMeanValue.Checked = PA.NormMode == NormalizationMode.Mean;
rbPerRowColumn.Checked = PA.NormMode != NormalizationMode.Mean;
if (PA.PeptideMatrix != null)
{
LoadPeptidesFromPermutationArrayToGrid();
}
if (PA.QuantificationMatrix != null)
{
LoadQuantificationFromPermutationArrayToGrid();
}
if (PA.NormalizedMatrix != null)
{
LoadNormalizedMatrixFromPeptideArrayToGrid();
}
bool gridsOK = ColorGrids();
eNotes.Text = PA.Notes;
imageReference.Image = null;
try
{
Image img = FileUtil.Base64ToImage(PA.ImageStr);
imageReference.Image = img;
}
catch { }
DrawColorMatrix();
if (!gridsOK)
{
MessageBox.Show("There is a problem in loading the file. It is highly recommended to re-run the analysis.", Analyzer.ProgramName);
}
}
catch
{
MessageBox.Show("There is a problem in loading the file. It is highly recommended to re-run the analysis.", Analyzer.ProgramName);
}
linkRun.Visible = true;
}
private void btnLoad_Click(object sender, EventArgs e)
{
try
{
DialogResult dlg = dlgOpenProject.ShowDialog();
if (dlg != DialogResult.OK)
{
return;
}
SetText(dlgOpenProject);
string filename = dlgOpenProject.FileName;
try
{
PA = PeptideArray.ReadFromFile(filename);
}
catch
{
MessageBox.Show("The file may be corrupted or not a valid PeSA project file.", Analyzer.ProgramName);
}
peptidelength = PA.PeptideLength;
ePeptideLength.Text = peptidelength.ToString();
rowsFirst = PA.RowsFirst;
colCount = PA.ColCount;
rowCount = PA.RowCount;
UpdateArrayInfo();
eNormalizeBy.Text = PA.NormalizationValue.ToString();
thresholdEntry.SetInitialValues(PA.GetPositiveThreshold(), PA.GetNegativeThreshold());
eFreqThreshold.Text = PA.FrequencyThreshold.ToString();
eAminoAcid.Text = PA.KeyAA.ToString();
eKeyPosition.Text = PA.KeyPosition?.ToString() ?? "";
SetRowColumnCount();
if (PA.PeptideMatrix != null)
{
LoadPeptidesFromPeptideArrayToGrid();
}
if (PA.QuantificationMatrix != null)
{
LoadQuantificationFromPeptideArrayToGrid();
}
if (PA.NormalizedMatrix != null)
{
LoadNormalizedMatrixFromPeptideArrayToGrid();
}
bool gridsOK = ColorGrids();
eNotes.Text = PA.Notes;
imageReference.Image = null;
try
{
Image img = FileUtil.Base64ToImage(PA.ImageStr);
imageReference.Image = img;
}
catch { }
if (!gridsOK)
{
MessageBox.Show("There is a problem in loading the file. It is highly recommended to re-run the analysis.", Analyzer.ProgramName);
}
}
catch
{
MessageBox.Show("There is a problem in loading the file. It is highly recommended to re-run the analysis.", Analyzer.ProgramName);
}
linkRun.Visible = true;
}