private void OnShelfClosed(object sender, ClosedEventArgs e)
{
// We need to cache the owner DesktopWindow (_desktopWindow) because this tool is an
// ImageViewer tool, disposed when the viewer component is disposed. Shelves, however,
// exist at the DesktopWindow level and there can only be one of each type of shelf
// open at the same time per DesktopWindow (otherwise things look funny). Because of
// this, we need to allow this event handling method to be called after this tool has
// already been disposed (e.g. viewer workspace closed), which is why we store the
// _desktopWindow variable.
//trigger an import of the Renamed files.
LocalDataStoreServiceClient client = new LocalDataStoreServiceClient();
client.Open();
try
{
FileImportRequest request = new FileImportRequest();
request.BadFileBehaviour = BadFileBehaviour.Move;
request.FileImportBehaviour = FileImportBehaviour.Move;
request.FilePaths = _filePaths;
request.Recursive = false;
client.Import(request);
client.Close();
}
catch
{
client.Abort();
throw;
}
_shelf.Closed -= OnShelfClosed;
_shelf = null;
}
private void ImportFiles()
{
LocalDataStoreServiceClient client = new LocalDataStoreServiceClient();
try
{
client.Open();
FileImportRequest request = new FileImportRequest();
request.FilePaths = new string[] { _tempFileDirectory };
request.Recursive = true;
request.FileImportBehaviour = FileImportBehaviour.Move;
client.Import(request);
client.Close();
}
catch
{
client.Abort();
throw;
}
}
/// <summary>
/// Imports the given dicom files into the local storage
/// </summary>
/// <param name="dicomFiles"></param>
protected void ImportDicomFiles(IEnumerable <string> dicomFiles)
{
try
{
LocalDataStoreServiceClient client = new LocalDataStoreServiceClient();
client.Open();
try
{
FileImportRequest request = new FileImportRequest();
request.BadFileBehaviour = BadFileBehaviour.Move;
request.FileImportBehaviour = FileImportBehaviour.Move;
request.FilePaths = dicomFiles;
request.Recursive = false;
request.IsBackground = true;
client.Import(request);
client.Close();
}
catch (Exception ex)
{
client.Abort();
Platform.Log(LogLevel.Error, ex, "Failed to import Grid files into the local storage");
throw;
}
}
catch (Exception e)
{
Platform.Log(LogLevel.Error, e, "Failed to import Grid files into the local storage");
try
{
foreach (string file in dicomFiles)
{
File.Delete(file);
}
}
catch (Exception ex)
{
Platform.Log(LogLevel.Error, ex, "Failed to remove temp Grid files");
}
throw;
}
}
protected void ImportDicomFiles(IEnumerable<string> dicomFiles)
{
try
{
LocalDataStoreServiceClient client = new LocalDataStoreServiceClient();
client.Open();
try
{
FileImportRequest request = new FileImportRequest();
request.BadFileBehaviour = BadFileBehaviour.Move;
request.FileImportBehaviour = FileImportBehaviour.Move;
request.FilePaths = dicomFiles;
request.Recursive = false;
request.IsBackground = true;
client.Import(request);
client.Close();
}
catch (Exception)
{
client.Abort();
throw;
}
}
catch (Exception e)
{
Platform.Log(LogLevel.Error, e, "Failed to import Grid files into the local storage");
try
{
foreach (string file in dicomFiles)
{
File.Delete(file);
}
}
catch (Exception ex)
{
Platform.Log(LogLevel.Error, ex, "Failed to remove temp Grid files");
}
throw;
}
}
private void ImportFiles()
{
LocalDataStoreServiceClient client = new LocalDataStoreServiceClient();
try
{
client.Open();
FileImportRequest request = new FileImportRequest();
request.FilePaths = new string[] { _tempFileDirectory };
request.Recursive = true;
request.FileImportBehaviour = FileImportBehaviour.Move;
client.Import(request);
client.Close();
}
catch
{
client.Abort();
throw;
}
}
private bool SendAnnotationsToLocalStorageAndPacs(List <aim_dotnet.Annotation> annotations)
{
var model = new DcmModel();
var instanceInfos = new Dictionary <string, string>();
foreach (var annotation in annotations)
{
var tempFileName = System.IO.Path.GetTempFileName();
try
{
model.WriteAnnotationToFile(annotation, tempFileName);
}
catch (Exception ex)
{
Platform.Log(LogLevel.Error, "Failed to save annotation to temp file.", ex);
try
{
System.IO.File.Delete(tempFileName);
}
catch
{
}
continue;
}
var annFile = new DicomFile(tempFileName);
annFile.Load(DicomReadOptions.Default | DicomReadOptions.DoNotStorePixelDataInDataSet);
var annSopInstanceUid = annFile.DataSet[DicomTags.SopInstanceUid].GetString(0, string.Empty);
annFile = null;
instanceInfos.Add(annSopInstanceUid, tempFileName);
}
model = null;
if (instanceInfos.Count < 1)
{
return(false);
}
var imageAeTitle = string.Empty;
var imageSopProvider = ImageViewer.SelectedPresentationImage as IImageSopProvider;
if (imageSopProvider != null)
{
var localSopDataSource = imageSopProvider.ImageSop.DataSource as ILocalSopDataSource; //NativeDicomObject as DicomFile;
if (localSopDataSource != null)
{
imageAeTitle = localSopDataSource.File.SourceApplicationEntityTitle.Trim("\n\r".ToCharArray());
}
}
using (var localClient = new LocalDataStoreServiceClient())
{
try
{
localClient.Open();
var request = new FileImportRequest();
request.BadFileBehaviour = BadFileBehaviour.Delete;
request.FileImportBehaviour = FileImportBehaviour.Move;
var filePaths = new List <string>();
foreach (var instanceInfo in instanceInfos)
{
var annSopInstanceUid = instanceInfo.Key;
var tempFileName = instanceInfo.Value;
filePaths.Add(tempFileName);
if (!string.IsNullOrEmpty(imageAeTitle))
{
lock (_mapLock)
_sopInstanceUidToAeTitle.Add(annSopInstanceUid, imageAeTitle);
}
}
request.FilePaths = filePaths.ToArray();
request.IsBackground = true;
request.Recursive = false;
localClient.Import(request);
localClient.Close();
}
catch (Exception ex)
{
localClient.Abort();
Platform.Log(LogLevel.Error, ex);
DesktopWindow.ShowMessageBox("Failed to store your annotation(s).", "Annotation Import Error", MessageBoxActions.Ok);
return(false);
}
}
return(true);
}
private void Rename(IBackgroundTaskContext context)
{
try
{
_tempPath = String.Format(".\\temp\\{0}", Path.GetRandomFileName());
Directory.CreateDirectory(_tempPath);
_tempPath = Path.GetFullPath(_tempPath);
context.ReportProgress(new BackgroundTaskProgress(0, "Renaming Study"));
int numberOfSops = LocalStudyLoader.Start(new StudyLoaderArgs(this.Context.SelectedStudy.StudyInstanceUid, null));
if (numberOfSops <= 0)
{
return;
}
for (int i = 0; i < numberOfSops; ++i)
{
string message = String.Format("{0} of {1}", i.ToString(), numberOfSops.ToString());
Platform.Log(LogLevel.Info, message);
Sop sop = LocalStudyLoader.LoadNextSop();
ILocalSopDataSource localsource = (ILocalSopDataSource)sop.DataSource;
string progressMessage = localsource.Filename.ToString();
DicomFile file = ((ILocalSopDataSource)sop.DataSource).File;
//renamer.Anonymize(file);
StudyData originalData = new StudyData();
file.DataSet.LoadDicomFields(originalData);
originalData.PatientId = _component.PatientId;
originalData.PatientsBirthDate = _component.PatientsBirthDate;
originalData.PatientsNameRaw = _component.PatientsName;
originalData.AccessionNumber = _component.AccessionNumber;
originalData.StudyDate = _component.StudyDate;
originalData.StudyDescription = _component.StudyDescription;
file.DataSet.SaveDicomFields(originalData);
file.Save(String.Format("{0}\\{1}.dcm", _tempPath, i));
int progressPercent = (int)Math.Floor((i + 1) / (float)numberOfSops * 100);
//string progressMessage = String.Format(SR.MessageAnonymizingStudy, _tempPath);
context.ReportProgress(new BackgroundTaskProgress(progressPercent, progressMessage));
// This code deletes the study from the database, so that when it is re-imported the changed fields
// will appear
}
using (IDataStoreStudyRemover studyRemover = DataAccessLayer.GetIDataStoreStudyRemover())
{
studyRemover.RemoveStudy(this.Context.SelectedStudy.StudyInstanceUid);
}
//trigger an import of the Renamed files.
LocalDataStoreServiceClient client = new LocalDataStoreServiceClient();
client.Open();
try
{
FileImportRequest request = new FileImportRequest();
request.BadFileBehaviour = BadFileBehaviour.Move;
request.FileImportBehaviour = FileImportBehaviour.Move;
List <string> filePaths = new List <string>();
filePaths.Add(_tempPath);
request.FilePaths = filePaths;
request.Recursive = true;
client.Import(request);
client.Close();
// Need to refresh study list in order for changed values to appear
// This method doesn't work. Need to manually click 'Search' again
//this.Context.RefreshStudyList();
}
catch
{
client.Abort();
throw;
}
//this.Context.RefreshStudyList();
context.Complete();
}
catch (Exception e)
{
context.Error(e);
}
}
private void OnShelfClosed(object sender, ClosedEventArgs e)
{
// We need to cache the owner DesktopWindow (_desktopWindow) because this tool is an
// ImageViewer tool, disposed when the viewer component is disposed. Shelves, however,
// exist at the DesktopWindow level and there can only be one of each type of shelf
// open at the same time per DesktopWindow (otherwise things look funny). Because of
// this, we need to allow this event handling method to be called after this tool has
// already been disposed (e.g. viewer workspace closed), which is why we store the
// _desktopWindow variable.
//trigger an import of the Renamed files.
LocalDataStoreServiceClient client = new LocalDataStoreServiceClient();
client.Open();
try
{
FileImportRequest request = new FileImportRequest();
request.BadFileBehaviour = BadFileBehaviour.Move;
request.FileImportBehaviour = FileImportBehaviour.Move;
request.FilePaths = _filePaths;
request.Recursive = false;
client.Import(request);
client.Close();
}
catch
{
client.Abort();
throw;
}
_shelf.Closed -= OnShelfClosed;
_shelf = null;
}
private bool SendAnnotationsToLocalStorageAndPacs(List <aim_dotnet.Annotation> annotations)
{
// NOTE: This code assumes that all images came from the same server.
// 0. Save each annotation to a temp DICOM file
DcmModel model = new DcmModel();
// Map of InstanceUID=>fileName
Dictionary <string, string> instanceInfos = new Dictionary <string, string>();
foreach (aim_dotnet.Annotation annotation in annotations)
{
// Save annotation to a temp file first
string tempFileName = System.IO.Path.GetTempFileName();
try
{
model.WriteAnnotationToFile(annotation, tempFileName);
}
catch (Exception ex)
{
Platform.Log(LogLevel.Error, "Failed to save annotation to temp file.", ex);
try
{
System.IO.File.Delete(tempFileName);
}
catch
{
}
continue;
}
// Get SOP Instance UID of our annotation
DicomFile annFile = new DicomFile(tempFileName);
annFile.Load(DicomReadOptions.Default | DicomReadOptions.DoNotStorePixelDataInDataSet);
string annSopInstanceUid = annFile.DataSet[DicomTags.SopInstanceUid].GetString(0, string.Empty);
annFile = null;
instanceInfos.Add(annSopInstanceUid, tempFileName);
}
model = null;
if (instanceInfos.Count < 1)
{
return(false); // Save failed
}
// Get AE Title for remote storage. NOTE: we use AE Title of the first image for all images
string imageAeTitle = string.Empty;
IImageSopProvider imageSopProvider = this.ImageViewer.SelectedPresentationImage as IImageSopProvider;
if (imageSopProvider != null)
{
//imageAeTitle = imageSopProvider.ImageSop[DicomTags.SourceApplicationEntityTitle].GetString(0, string.Empty);
ILocalSopDataSource localSopDataSource = imageSopProvider.ImageSop.DataSource as ILocalSopDataSource; //NativeDicomObject as DicomFile;
if (localSopDataSource != null)
{
imageAeTitle = localSopDataSource.File.SourceApplicationEntityTitle.Trim("\n\r".ToCharArray());
}
}
// 1. Import into the local storage
using (LocalDataStoreServiceClient localClient = new LocalDataStoreServiceClient())
{
try
{
localClient.Open();
FileImportRequest request = new FileImportRequest();
request.BadFileBehaviour = BadFileBehaviour.Delete;
request.FileImportBehaviour = FileImportBehaviour.Move;
List <string> filePaths = new List <string>();
foreach (KeyValuePair <string, string> instanceInfo in instanceInfos)
{
string annSopInstanceUid = instanceInfo.Key;
string tempFileName = instanceInfo.Value;
filePaths.Add(tempFileName);
// Store destination AE title for the annotaion
if (!string.IsNullOrEmpty(imageAeTitle))
{
lock (_mapLock)
_sopInstanceUidToAeTitle.Add(annSopInstanceUid, imageAeTitle);
}
}
request.FilePaths = filePaths.ToArray();
request.IsBackground = true;
request.Recursive = false;
localClient.Import(request);
localClient.Close();
}
catch (Exception ex)
{
localClient.Abort();
Platform.Log(LogLevel.Error, ex);
this.DesktopWindow.ShowMessageBox("Failed to store your annotation(s).", "Annotation Import Error", MessageBoxActions.Ok);
return(false);
}
}
// 2. Saving to PACS happens after the SOP Instance is imported (OnSopInstanceImported)
return(true);
}
/// <summary>
/// Called by the framework when the user clicks the "apply" menu item or toolbar button.
/// </summary>
public void Edit()
{
_component = new DicomEditorComponent();
List<string> filePaths = new List<string>();
// Loop through all items in clipboard (code from CC forum)
foreach (IClipboardItem item in this.Context.SelectedClipboardItems)
{
List<IPresentationImage> queue = new List<IPresentationImage>();
if (item.Item is IPresentationImage)
Enqueue(queue, (IPresentationImage)item.Item);
else if (item.Item is IDisplaySet)
Enqueue(queue, (IDisplaySet)item.Item);
else if (item.Item is IImageSet)
Enqueue(queue, (IImageSet)item.Item);
foreach (IPresentationImage image in queue)
{
if (image is IImageSopProvider)
{
ImageSop imageSop = ((IImageSopProvider)image).ImageSop;
ILocalSopDataSource localsource = (ILocalSopDataSource)imageSop.DataSource;
// Load each image path into dicom editor, and record path in array for later, re-import
_component.Load(localsource.SourceMessage);
filePaths.Add(localsource.Filename);
}
}
}
//common to both contexts
if (_shelf != null)
{
_shelf.Activate();
}
else
{
_shelf = ApplicationComponent.LaunchAsShelf(
this.Context.DesktopWindow,
_component,
"Dicom Editor",
"Dicom Editor",
ShelfDisplayHint.DockRight | ShelfDisplayHint.DockAutoHide);
_shelf.Closed += OnShelfClosed;
}
_component.UpdateComponent();
//trigger an import of the Renamed files.
LocalDataStoreServiceClient client = new LocalDataStoreServiceClient();
client.Open();
try
{
FileImportRequest request = new FileImportRequest();
request.BadFileBehaviour = BadFileBehaviour.Move;
request.FileImportBehaviour = FileImportBehaviour.Move;
request.FilePaths = filePaths;
request.Recursive = false;
client.Import(request);
client.Close();
}
catch
{
client.Abort();
throw;
}
}
/// <summary>
/// Called by the framework when the user clicks the "apply" menu item or toolbar button.
/// </summary>
public void Edit()
{
_component = new DicomEditorComponent();
List <string> filePaths = new List <string>();
// Loop through all items in clipboard (code from CC forum)
foreach (IClipboardItem item in this.Context.SelectedClipboardItems)
{
List <IPresentationImage> queue = new List <IPresentationImage>();
if (item.Item is IPresentationImage)
{
Enqueue(queue, (IPresentationImage)item.Item);
}
else if (item.Item is IDisplaySet)
{
Enqueue(queue, (IDisplaySet)item.Item);
}
else if (item.Item is IImageSet)
{
Enqueue(queue, (IImageSet)item.Item);
}
foreach (IPresentationImage image in queue)
{
if (image is IImageSopProvider)
{
ImageSop imageSop = ((IImageSopProvider)image).ImageSop;
ILocalSopDataSource localsource = (ILocalSopDataSource)imageSop.DataSource;
// Load each image path into dicom editor, and record path in array for later, re-import
_component.Load(localsource.SourceMessage);
filePaths.Add(localsource.Filename);
}
}
}
//common to both contexts
if (_shelf != null)
{
_shelf.Activate();
}
else
{
_shelf = ApplicationComponent.LaunchAsShelf(
this.Context.DesktopWindow,
_component,
"Dicom Editor",
"Dicom Editor",
ShelfDisplayHint.DockRight | ShelfDisplayHint.DockAutoHide);
_shelf.Closed += OnShelfClosed;
}
_component.UpdateComponent();
//trigger an import of the Renamed files.
LocalDataStoreServiceClient client = new LocalDataStoreServiceClient();
client.Open();
try
{
FileImportRequest request = new FileImportRequest();
request.BadFileBehaviour = BadFileBehaviour.Move;
request.FileImportBehaviour = FileImportBehaviour.Move;
request.FilePaths = filePaths;
request.Recursive = false;
client.Import(request);
client.Close();
}
catch
{
client.Abort();
throw;
}
}
