public void Save(string fileName)
{
try
{
//Create a new XmlTextWriter.
// XmlTextWriter xwriter = new XmlTextWriter(Console.Out);
var xwriter = new XmlTextWriter(fileName, System.Text.Encoding.UTF8);
xwriter.Formatting = Formatting.None;
xwriter.IndentChar = '\t';
xwriter.Indentation = 1;
//Write the beginning of the document including the
//document declaration. Standalone is true.
xwriter.WriteStartDocument(true);
//Write the beginning of the "data" element. This is
//the opening tag to our data
xwriter.WriteWhitespace("\n");
xwriter.WriteStartElement("parameters");
xwriter.WriteWhitespace("\n\t");
xwriter.WriteElementString("version", "1.0");
xwriter.WriteWhitespace("\n\t");
this.PeakProcessorParameters.SaveV1PeakParameters(xwriter);
this.DTAGenerationParameters.SaveV1DTAGenerationParameters(xwriter);
this.HornTransformParameters.SaveV1HornTransformParameters(xwriter);
this.HornTransformParameters.SaveV1MiscellaneousParameters(xwriter);
if (FTICRPreProcessParameters.IsToBePreprocessed)
{
FTICRPreProcessParameters.SaveV1FTICRPreProcessOptions(xwriter);
}
// And the isotope abundances.
HornTransformParameters.ElementIsotopeComposition.SaveV1ElementIsotopes(xwriter);
xwriter.WriteEndElement();
//End the document
xwriter.WriteEndDocument();
xwriter.WriteWhitespace("\n");
//Flush the xml document to the underlying stream and
//close the underlying stream. The data will not be
//written out to the stream until either the Flush()
//method is called or the Close() method is called.
xwriter.Close();
}
catch (Exception ex)
{
Console.WriteLine(ex.Message);
Console.WriteLine(PRISM.clsStackTraceFormatter.GetExceptionStackTraceMultiLine(ex));
}
}
public void Load(string xmlFileName)
{
this.ParameterFilename = xmlFileName;
var rdr = new XmlTextReader(xmlFileName);
//Read each node in the tree.
while (rdr.Read())
{
switch (rdr.NodeType)
{
case XmlNodeType.Element:
if (rdr.Name == "PeakParameters")
{
PeakProcessorParameters.LoadV1PeakParameters(rdr);
}
else if (rdr.Name == "HornTransformParameters")
{
HornTransformParameters.LoadV1HornTransformParameters(rdr);
if (HornTransformParameters.NumScansToAdvance == 0)
{
HornTransformParameters.NumScansToAdvance = 1;
}
}
else if (rdr.Name == "Miscellaneous")
{
HornTransformParameters.LoadV1MiscellaneousParameters(rdr);
}
else if (rdr.Name == "FTICRRawPreProcessingOptions")
{
FTICRPreProcessParameters.LoadV1FTICRPreProcessOptions(rdr);
}
else if (rdr.Name == "ElementIsotopes")
{
HornTransformParameters.ElementIsotopeComposition.LoadV1ElementIsotopes(rdr);
}
else if (rdr.Name == "DTAGenerationParameters")
{
DTAGenerationParameters.LoadV1DTAGenerationParameters(rdr);
}
break;
default:
break;
}
}
rdr.Close();
}
