public override IEnumerable <ConsolidatedComponentPeak> RetrieveComponentPeaks()
{
// init container
var componentPeaks = new List <ConsolidatedComponentPeak>();
// get entity reader
var entityReader = EntityDataService.CreateEntityItemReader();
// read all the peaks
foreach (var ion in entityReader.ReadAll <UnknownFeatureIonInstanceItem>())
{
// 1 ion has at least 1 peak, monoisotopic was used for Ion information
// (UnknownCompound..:process each ion individually)
// make ConsolidatedComponentPeak
var fid = Convert.ToUInt64(ion.FeatureID);
componentPeaks.Add(new ConsolidatedComponentPeak
{
Mass = m_dict[fid].mass,
RetentionTime = m_dict[fid].rt,
Area = ion.Area,
IonDescription = "unknown",
FileID = ion.FileID,
IdentifyingNodeNumber = ProcessingNodeNumber,
RelatedItemIDs = ion.GetIDs()
});
}
return(componentPeaks);
}
