public void ExtractESDATDataFromNoHeaderFileTest() { var mockDefaultValueProvider = new Mock <IWQDefaultValueProvider>(); mockDefaultValueProvider.Setup(x => x.OrganizationNameSampleCollection).Returns("Default organization name from provider"); var chemistryFileToImport = CreateCSVDataToImport(Path.Combine(AppDomain.CurrentDomain.BaseDirectory, "DataFiles", "ChemistryFileExample.csv")); var sampleFileToImport = CreateCSVDataToImport(Path.Combine(AppDomain.CurrentDomain.BaseDirectory, "DataFiles", "SampleFileExample.csv")); var testESDATDataToImport = new ESDATDataToImport(null, sampleFileToImport, chemistryFileToImport); var simpleValueAssginer = new SimpleValueAssigner(); var sampleDataImporter = ESDATTestHelper.BuildSampleDataFileImporter(); var sampleFileChildObjectExtractConfiguration = new SampleFileChildObjectExtractConfiguration(sampleDataImporter, "SampleFileData", simpleValueAssginer); var chemistryDataImporter = ESDATTestHelper.BuildChemistryFileImporter(); var chemistryFileChildObjectExtractConfiguration = new ChemistryFileChildObjectExtractConfiguration(chemistryDataImporter, "ChemistryData", simpleValueAssginer); var testESDATDataImporter = new ESDATDataImporter(ResultLevel.ERROR, mockDefaultValueProvider.Object); AddXMLExtractConfigurationsToImporter(testESDATDataImporter); testESDATDataImporter.AddExtractConfiguration(sampleFileChildObjectExtractConfiguration); testESDATDataImporter.AddExtractConfiguration(chemistryFileChildObjectExtractConfiguration); var extractResult = testESDATDataImporter.Extract <ESDATModel>(testESDATDataToImport); Assert.NotNull(extractResult); var entity = extractResult.ExtractedEntities.Cast <ESDATModel>().SingleOrDefault(); Assert.NotNull(entity); Assert.AreEqual("Default organization name from provider", entity.LabName); Assert.AreEqual(3, entity.SampleFileData.Count()); Assert.AreEqual(9, entity.ChemistryData.Count()); }
private ESDATModel extractEsdatModel() { var mockDefaultValueProvider = new Mock <IWQDefaultValueProvider>(); var headerFileToImport = ESDATTestHelper.CreateXMLDatoToImport(Path.Combine(AppDomain.CurrentDomain.BaseDirectory, "DataFiles", "XMLSample.xml")); var chemistryFileToImport = ESDATTestHelper.CreateCSVDataToImport(Path.Combine(AppDomain.CurrentDomain.BaseDirectory, "DataFiles", "ChemistryFileExample.csv")); var sampleFileToImport = ESDATTestHelper.CreateCSVDataToImport(Path.Combine(AppDomain.CurrentDomain.BaseDirectory, "DataFiles", "SampleFileExample.csv")); var testESDATDataToImport = new ESDATDataToImport(headerFileToImport, sampleFileToImport, chemistryFileToImport); var simpleValueAssginer = new SimpleValueAssigner(); var sampleDataImporter = ESDATTestHelper.BuildSampleDataFileImporter(); var sampleFileChildObjectExtractConfiguration = new SampleFileChildObjectExtractConfiguration(sampleDataImporter, "SampleFileData", simpleValueAssginer); var chemistryDataImporter = ESDATTestHelper.BuildChemistryFileImporter(); var chemistryFileChildObjectExtractConfiguration = new ChemistryFileChildObjectExtractConfiguration(chemistryDataImporter, "ChemistryData", simpleValueAssginer); var testESDATDataImporter = new ESDATDataImporter(ResultLevel.ERROR, mockDefaultValueProvider.Object); ESDATTestHelper.AddXMLExtractConfigurationsToImporter(testESDATDataImporter); testESDATDataImporter.AddExtractConfiguration(sampleFileChildObjectExtractConfiguration); testESDATDataImporter.AddExtractConfiguration(chemistryFileChildObjectExtractConfiguration); var extractResult = testESDATDataImporter.Extract <ESDATModel>(testESDATDataToImport); return(extractResult.ExtractedEntities.First()); }
public void ExtractESDATDataFromNoHeaderFileTest() { var mockDefaultValueProvider = new Mock<IWQDefaultValueProvider>(); mockDefaultValueProvider.Setup(x => x.OrganizationNameSampleCollection).Returns("Default organization name from provider"); var chemistryFileToImport = CreateCSVDataToImport(Path.Combine(AppDomain.CurrentDomain.BaseDirectory, "DataFiles", "ChemistryFileExample.csv")); var sampleFileToImport = CreateCSVDataToImport(Path.Combine(AppDomain.CurrentDomain.BaseDirectory, "DataFiles", "SampleFileExample.csv")); var testESDATDataToImport = new ESDATDataToImport(null, sampleFileToImport, chemistryFileToImport); var simpleValueAssginer = new SimpleValueAssigner(); var sampleDataImporter = ESDATTestHelper.BuildSampleDataFileImporter(); var sampleFileChildObjectExtractConfiguration = new SampleFileChildObjectExtractConfiguration(sampleDataImporter, "SampleFileData", simpleValueAssginer); var chemistryDataImporter = ESDATTestHelper.BuildChemistryFileImporter(); var chemistryFileChildObjectExtractConfiguration = new ChemistryFileChildObjectExtractConfiguration(chemistryDataImporter, "ChemistryData", simpleValueAssginer); var testESDATDataImporter = new ESDATDataImporter(ResultLevel.ERROR, mockDefaultValueProvider.Object); AddXMLExtractConfigurationsToImporter(testESDATDataImporter); testESDATDataImporter.AddExtractConfiguration(sampleFileChildObjectExtractConfiguration); testESDATDataImporter.AddExtractConfiguration(chemistryFileChildObjectExtractConfiguration); var extractResult = testESDATDataImporter.Extract<ESDATModel>(testESDATDataToImport); Assert.NotNull(extractResult); var entity = extractResult.ExtractedEntities.Cast<ESDATModel>().SingleOrDefault(); Assert.NotNull(entity); Assert.AreEqual("Default organization name from provider", entity.LabName); Assert.AreEqual(3, entity.SampleFileData.Count()); Assert.AreEqual(9, entity.ChemistryData.Count()); }
public static IDataImporter BuildESDATDataImporter(IWQDefaultValueProvider wqDefaultValueProvider) { var simpleValueAssginer = new SimpleValueAssigner(); var sampleDataImporter = BuildSampleDataFileImporter(); var sampleFileChildObjectExtractConfiguration = new SampleFileChildObjectExtractConfiguration(sampleDataImporter, "SampleFileData", simpleValueAssginer); var chemistryDataImporter = BuildChemistryFileImporter(); var chemistryFileChildObjectExtractConfiguration = new ChemistryFileChildObjectExtractConfiguration(chemistryDataImporter, "ChemistryData", simpleValueAssginer); var ESDATDataImporter = new ESDATDataImporter(ResultLevel.ERROR, wqDefaultValueProvider); AddXMLExtractConfigurationsToImporter(ESDATDataImporter); ESDATDataImporter.AddExtractConfiguration(sampleFileChildObjectExtractConfiguration); ESDATDataImporter.AddExtractConfiguration(chemistryFileChildObjectExtractConfiguration); return(ESDATDataImporter); }
public static IDataImporter BuildESDATDataImporter(IWQDefaultValueProvider wqDefaultValueProvider) { var simpleValueAssginer = new SimpleValueAssigner(); var sampleDataImporter = BuildSampleDataFileImporter(); var sampleFileChildObjectExtractConfiguration = new SampleFileChildObjectExtractConfiguration(sampleDataImporter, "SampleFileData", simpleValueAssginer); var chemistryDataImporter = BuildChemistryFileImporter(); var chemistryFileChildObjectExtractConfiguration = new ChemistryFileChildObjectExtractConfiguration(chemistryDataImporter, "ChemistryData", simpleValueAssginer); var ESDATDataImporter = new ESDATDataImporter(ResultLevel.ERROR, wqDefaultValueProvider); AddXMLExtractConfigurationsToImporter(ESDATDataImporter); ESDATDataImporter.AddExtractConfiguration(sampleFileChildObjectExtractConfiguration); ESDATDataImporter.AddExtractConfiguration(chemistryFileChildObjectExtractConfiguration); return ESDATDataImporter; }
private ESDATModel extractEsdatModel() { var mockDefaultValueProvider = new Mock<IWQDefaultValueProvider>(); var headerFileToImport = ESDATTestHelper.CreateXMLDatoToImport(Path.Combine(AppDomain.CurrentDomain.BaseDirectory, "DataFiles", "XMLSample.xml")); var chemistryFileToImport = ESDATTestHelper.CreateCSVDataToImport(Path.Combine(AppDomain.CurrentDomain.BaseDirectory, "DataFiles", "ChemistryFileExample.csv")); var sampleFileToImport = ESDATTestHelper.CreateCSVDataToImport(Path.Combine(AppDomain.CurrentDomain.BaseDirectory, "DataFiles", "SampleFileExample.csv")); var testESDATDataToImport = new ESDATDataToImport(headerFileToImport, sampleFileToImport, chemistryFileToImport); var simpleValueAssginer = new SimpleValueAssigner(); var sampleDataImporter = ESDATTestHelper.BuildSampleDataFileImporter(); var sampleFileChildObjectExtractConfiguration = new SampleFileChildObjectExtractConfiguration(sampleDataImporter, "SampleFileData", simpleValueAssginer); var chemistryDataImporter = ESDATTestHelper.BuildChemistryFileImporter(); var chemistryFileChildObjectExtractConfiguration = new ChemistryFileChildObjectExtractConfiguration(chemistryDataImporter, "ChemistryData", simpleValueAssginer); var testESDATDataImporter = new ESDATDataImporter(ResultLevel.ERROR, mockDefaultValueProvider.Object); ESDATTestHelper.AddXMLExtractConfigurationsToImporter(testESDATDataImporter); testESDATDataImporter.AddExtractConfiguration(sampleFileChildObjectExtractConfiguration); testESDATDataImporter.AddExtractConfiguration(chemistryFileChildObjectExtractConfiguration); var extractResult = testESDATDataImporter.Extract<ESDATModel>(testESDATDataToImport); return extractResult.ExtractedEntities.First(); }