public override IEnumerable <DocNode> GetChoices(bool useFilter)
{
SrmSettings settings = DocSettings;
List <DocNode> listPeptides = new List <DocNode>();
foreach (var nodePep in DocNode.GetPeptideNodes(settings, useFilter))
{
var nodePepMaterialized = nodePep.ChangeSettings(settings, SrmSettingsDiff.ALL);
if (!useFilter || settings.TransitionSettings.Libraries.MinIonCount == 0 || nodePepMaterialized.Children.Count != 0)
{
listPeptides.Add(nodePepMaterialized);
}
}
PeptideRankId rankId = DocSettings.PeptideSettings.Libraries.RankId;
if (rankId != null && !DocNode.IsPeptideList)
{
listPeptides = PeptideGroup.RankPeptides(listPeptides, settings, useFilter).ToList();
}
MergeChosen(listPeptides, useFilter, node => ((PeptideDocNode)node).Key);
return(listPeptides);
}
public override IEnumerable <DocNode> GetChoices(bool useFilter)
{
SrmSettings settings = DocSettings;
List <DocNode> listPeptides = new List <DocNode>();
foreach (var nodePep in DocNode.GetPeptideNodes(settings, useFilter))
{
listPeptides.Add(nodePep.ChangeSettings(settings, SrmSettingsDiff.ALL));
}
PeptideRankId rankId = DocSettings.PeptideSettings.Libraries.RankId;
if (rankId != null && !DocNode.IsPeptideList)
{
listPeptides = PeptideGroup.RankPeptides(listPeptides, settings, useFilter).ToList();
}
MergeChosen(listPeptides, useFilter, node => ((PeptideDocNode)node).Key);
return(listPeptides);
}