Example #1
0
        public override bool Equals(object obj)
        {
            DisulfideBond bond = obj as DisulfideBond;

            return(bond != null &&
                   bond.OneBasedBeginPosition == OneBasedBeginPosition &&
                   bond.OneBasedEndPosition == OneBasedEndPosition &&
                   bond.Description == Description);
        }
Example #2
0
        public void TestHashAndEqualsDisulfide()
        {
            DisulfideBond bond7   = new DisulfideBond(1, 2, "description");
            DisulfideBond bond007 = new DisulfideBond(1, 2, "description");
            DisulfideBond bond8   = new DisulfideBond(1, 2, null);
            DisulfideBond bond9   = new DisulfideBond(1, "description");
            DisulfideBond bond17  = new DisulfideBond(2, "description");

            Assert.AreEqual(bond7, bond007);
            Assert.AreNotEqual(bond007, bond8);
            Assert.AreNotEqual(bond007, bond9);
            Assert.AreNotEqual(bond007, bond17);
        }
Example #3
0
        public static void CompareProteinProperties()
        {
            DatabaseReference d = new DatabaseReference("asdf", "asdfg", new List <Tuple <string, string> > {
                new Tuple <string, string>("bbb", "ccc")
            });
            DatabaseReference dd = new DatabaseReference("asdf", "asdfg", new List <Tuple <string, string> > {
                new Tuple <string, string>("bbb", "ccc")
            });
            DatabaseReference de = new DatabaseReference("asdf", "asdefg", new List <Tuple <string, string> > {
                new Tuple <string, string>("bbb", "ccc")
            });
            DatabaseReference df = new DatabaseReference("asddf", "asdfg", new List <Tuple <string, string> > {
                new Tuple <string, string>("bbb", "ccc")
            });
            DatabaseReference dg = new DatabaseReference("asdf", "asdfg", new List <Tuple <string, string> > {
                new Tuple <string, string>("babb", "ccc")
            });
            DatabaseReference dh = new DatabaseReference("asdf", "asdfg", new List <Tuple <string, string> > {
                new Tuple <string, string>("bbb", "cccf")
            });

            Assert.True(dd.Equals(d));
            Assert.False(de.Equals(d));
            Assert.False(df.Equals(d));
            Assert.False(dg.Equals(d));
            Assert.False(dh.Equals(d));
            Assert.AreEqual(5, new HashSet <DatabaseReference> {
                d, dd, de, df, dg, dh
            }.Count);

            SequenceVariation s     = new SequenceVariation(1, "hello", "hey", "hi");
            SequenceVariation sv    = new SequenceVariation(1, "hello", "hey", "hi");
            SequenceVariation sss   = new SequenceVariation(2, "hallo", "hey", "hi");
            SequenceVariation ssss  = new SequenceVariation(1, "hello", "heyy", "hi");
            SequenceVariation sssss = new SequenceVariation(1, "hello", "hey", "hii");

            Assert.True(s.Equals(sv));
            Assert.False(s.Equals(sss));
            Assert.False(s.Equals(ssss));
            Assert.False(s.Equals(sssss));
            Assert.AreEqual(4, new HashSet <SequenceVariation> {
                s, sv, sss, ssss, sssss
            }.Count);

            DisulfideBond b    = new DisulfideBond(1, "hello");
            DisulfideBond bb   = new DisulfideBond(1, "hello");
            DisulfideBond bbb  = new DisulfideBond(1, 2, "hello");
            DisulfideBond bbbb = new DisulfideBond(1, 2, "hello");
            DisulfideBond ba   = new DisulfideBond(1, 3, "hello");
            DisulfideBond baa  = new DisulfideBond(2, 2, "hello");
            DisulfideBond baaa = new DisulfideBond(1, 2, "hallo");

            Assert.AreEqual(b, bb);
            Assert.AreEqual(bbb, bbbb);
            Assert.AreNotEqual(b, bbb);
            Assert.AreNotEqual(ba, bbb);
            Assert.AreNotEqual(baa, bbb);
            Assert.AreNotEqual(baaa, bbb);
            Assert.AreEqual(5, new HashSet <DisulfideBond> {
                b, bb, bbb, bbbb, ba, baa, baaa
            }.Count);

            ProteolysisProduct pp   = new ProteolysisProduct(1, 1, "hello");
            ProteolysisProduct paaa = new ProteolysisProduct(1, 1, "hello");
            ProteolysisProduct p    = new ProteolysisProduct(null, null, "hello");
            ProteolysisProduct ppp  = new ProteolysisProduct(1, 2, "hello");
            ProteolysisProduct pa   = new ProteolysisProduct(2, 1, "hello");
            ProteolysisProduct paa  = new ProteolysisProduct(1, 1, "hallo");

            Assert.AreEqual(pp, paaa);
            Assert.AreNotEqual(p, pp);
            Assert.AreNotEqual(pp, ppp);
            Assert.AreNotEqual(pp, pa);
            Assert.AreNotEqual(pp, paa);
            Assert.AreEqual(5, new HashSet <ProteolysisProduct> {
                p, pp, ppp, pa, paa, paaa
            }.Count);
        }