/* This is a convenient way to add a block, if you're using standard demodulation
* configurations. This method is thread-safe.
*/
//public void AddBlock(Block b, string[] demodulationConfigs)
//{
// log("Adding block " + b.Config.Settings["cluster"] + " - " + b.Config.Settings["clusterIndex"]);
// BlockDemodulator blockDemodulator = new BlockDemodulator();
// foreach (string dcName in demodulationConfigs)
// {
// DemodulationConfig dc = DemodulationConfig.GetStandardDemodulationConfig(dcName, b);
// //DemodulatedBlock dBlock = blockDemodulator.DemodulateBlockNL(b, dc);
// DemodulatedBlock dBlock = blockDemodulator.DemodulateBlock(b, dc);
// blockStore.AddDBlock(dBlock);
// }
//}
public void AddBlock(Block b)
{
BlockDemodulator blockDemodulator = new BlockDemodulator();
log("Demodulating block " + b.Config.Settings["cluster"] + " - " + b.Config.Settings["clusterIndex"]);
DemodulatedBlock db = blockDemodulator.DemodulateBlock(b, DemodulationConfig.MakeStandardDemodulationConfig());
blockStore.AddDBlock(db);
TimeSpan ts2 = DateTime.Now.Subtract(threadManager.GetCurrentAnalysisStart());
log("Added block " + b.Config.Settings["cluster"] + " - " + b.Config.Settings["clusterIndex"] + " after " + ts2.TotalSeconds.ToString() + " seconds.");
}
/* This is a convenient way to add a block, if you're using standard demodulation
* configurations. This method is thread-safe.
*/
public void AddBlock(Block b, string[] demodulationConfigs)
{
log("Adding block " + b.Config.Settings["cluster"] + " - " + b.Config.Settings["clusterIndex"]);
BlockDemodulator blockDemodulator = new BlockDemodulator();
foreach (string dcName in demodulationConfigs)
{
DemodulationConfig dc = DemodulationConfig.GetStandardDemodulationConfig(dcName, b);
DemodulatedBlock dBlock = blockDemodulator.DemodulateBlockNL(b, dc);
blockStore.AddDBlock(dBlock);
}
}
public void MagDataAcquisitionFinished(Block b)
{
this.Block = b;
mainWindow.AppendToTextArea("Demodulating magnetic data block.");
DemodulationConfig dc = DemodulationConfig.GetStandardDemodulationConfig("magnetometers", b);
DBlock = blockDemodulator.DemodulateMagDataBlock(b, dc);
// liveViewer.AddDBlock(DBlock);
haveBlock = true;
appState = AppState.stopped;
mainWindow.AppendToTextArea("Acquisition finished");
SetStatusReady();
}
public void AcquisitionFinished(Block b)
{
this.Block = b;
mainWindow.AppendToTextArea("Demodulating block.");
// "cgate11Fixed" for Ar, "centreFixedKr" for Kr
DemodulationConfig dc = DemodulationConfig.GetStandardDemodulationConfig("wgate5", b); // was cgate11fixed
DBlock = blockDemodulator.DemodulateBlock(b, dc); // blockDemodulator.DemodulateBlock(b, dc);
liveViewer.AddDBlock(DBlock);
//config.g
haveBlock = true;
appState = AppState.stopped;
mainWindow.AppendToTextArea("Acquisition finished");
SetStatusReady();
}
//public void TOFDemodulateBlocks(string[] blockFiles, string savePath)
//{
// // first of all test that the save location exists to avoid later disappointment.
// if (!Directory.Exists(Path.GetDirectoryName(savePath)))
// {
// log("Save path does not exist!!");
// return;
// }
// // initialise the accumulator
// tcsga = new TOFChannelSetGroupAccumulator();
// // queue the blocks - the last block analysed will take care of saving the results.
// foreach (string blockFile in blockFiles)
// {
// tofDemodulateParams tdp = new tofDemodulateParams();
// tdp.blockPath = blockFile;
// tdp.savePath = savePath;
// threadManager.AddToQueue(TOFDemodulateThreadWrapper, tdp);
// }
//}
//private void TOFDemodulateBlock(string blockPath, string savePath)
//{
// BlockSerializer bs = new BlockSerializer();
// string[] splitPath = blockPath.Split('\\');
// log("Loading block " + splitPath[splitPath.Length - 1]);
// Block b = bs.DeserializeBlockFromZippedXML(blockPath, "block.xml");
// log("Demodulating block " + b.Config.Settings["cluster"] + " - " + b.Config.Settings["clusterIndex"]);
// BlockTOFDemodulator btd = new BlockTOFDemodulator();
// TOFChannelSet tcs = btd.TOFDemodulateBlock(b, 0, true);
// log("Accumulating block " + b.Config.Settings["cluster"] + " - " + b.Config.Settings["clusterIndex"]);
// lock (accumulatorLock) tcsga.Add(tcs);
// // are we the last block to be added? If so, it's our job to save the results
// if (threadManager.RemainingJobs == 1)
// {
// // this lock should not be needed
// lock(accumulatorLock)
// {
// TOFChannelSetGroup tcsg = tcsga.GetResult();
// Stream fileStream = new FileStream(savePath, FileMode.Create);
// (new BinaryFormatter()).Serialize(fileStream, tcsg);
// fileStream.Close();
// }
// }
//}
//private void TOFDemodulateThreadWrapper(object parametersIn)
//{
// threadManager.QueueItemWrapper(delegate(object parms)
// {
// tofDemodulateParams parameters = (tofDemodulateParams)parms;
// TOFDemodulateBlock(parameters.blockPath, parameters.savePath);
// },
// parametersIn
// );
//}
//private struct tofDemodulateParams
//{
// public string blockPath;
// public string savePath;
// // this struct has a ToString method defined for error reporting porpoises.
// public override string ToString()
// {
// return blockPath;
// }
//}
#endregion
#region Testing
// Somewhere for SirCachealot to store test results that's accessible by Mathematica.
// Makes debugging easier and is needed as a workaround for the constant Mathematica
// NET/Link errors.
// public TOFChannelSetGroup ChanSetGroup;
// workarounds for NET/Link bugs
//public TOFChannelSet GetAveragedChannelSet(bool eSign, bool bSign, bool rfSign)
//{
// return ChanSetGroup.AverageChannelSetSignedByMachineState(eSign, bSign, rfSign);
//}
//public void LoadChannelSetGroup(string path)
//{
// BinaryFormatter bf = new BinaryFormatter();
// FileStream fs = new FileStream(path, FileMode.Open);
// ChanSetGroup = (TOFChannelSetGroup)bf.Deserialize(fs);
// fs.Close();
//}
public void Test1()
{
BlockSerializer bs = new BlockSerializer();
Block b = bs.DeserializeBlockFromZippedXML(
"C:\\Users\\jony\\Files\\Data\\SEDM\\v3\\2009\\October2009\\01Oct0900_0.zip", "block.xml");
BlockDemodulator bd = new BlockDemodulator();
DemodulatedBlock db = bd.DemodulateBlockNL(b,
DemodulationConfig.GetStandardDemodulationConfig("cgate11Fixed", b));
//JsonSerializer serializer = new JsonSerializer();
//using (StreamWriter sw = new StreamWriter("c:\\Users\\jony\\Desktop\\test.json"))
//using (JsonWriter writer = new JsonTextWriter(sw))
//{
// serializer.Serialize(writer, b.Config);
//}
//bs.SerializeBlockAsJSON("c:\\Users\\jony\\Desktop\\test.json", b);
}
private void AddBlock(string path, string normConfig)
{
Monitor.JobStarted();
string fileName = path.Split('\\').Last();
try
{
Controller.log("Adding block " + fileName);
using (BlockDatabaseDataContext dc = new BlockDatabaseDataContext())
{
BlockSerializer bls = new BlockSerializer();
Block b = bls.DeserializeBlockFromZippedXML(path, "block.xml");
Controller.log("Loaded " + fileName);
// at the moment the block data is normalized by dividing each "top" TOF through
// by the integral of the corresponding "norm" TOF over the gate in the function below.
// TODO: this could be improved!
b.Normalise(DemodulationConfig.GetStandardDemodulationConfig(normConfig, b).GatedDetectorExtractSpecs["norm"]);
// add some of the single point data to the Shot TOFs so that it gets analysed
string[] spvsToTOFulise = new string[] { "NorthCurrent", "SouthCurrent", "MiniFlux1",
"MiniFlux2", "MiniFlux3", "ProbePD", "PumpPD" };
b.TOFuliseSinglePointData(spvsToTOFulise);
// extract the metadata and config into a DB object
DBBlock dbb = new DBBlock();
dbb.cluster = (string)b.Config.Settings["cluster"];
dbb.clusterIndex = (int)b.Config.Settings["clusterIndex"];
dbb.include = false;
dbb.eState = (bool)b.Config.Settings["eState"];
dbb.bState = (bool)b.Config.Settings["bState"];
try
{
dbb.rfState = (bool)b.Config.Settings["rfState"];
}
catch (Exception)
{
// blocks from the old days had no rfState recorded in them.
dbb.rfState = true;
}
dbb.ePlus = (double)b.Config.Settings["ePlus"];
dbb.eMinus = (double)b.Config.Settings["eMinus"];
dbb.blockTime = (DateTime)b.TimeStamp;
byte[] bts = serializeAsByteArray(b.Config);
dbb.configBytes = bts;
// extract the TOFChannelSets
List <string> detectorsToExtract = new List <string>
{
"top", "norm", "magnetometer", "gnd", "battery", "topNormed", "NorthCurrent", "SouthCurrent",
"MiniFlux1", "MiniFlux2", "MiniFlux3", "ProbePD", "PumpPD"
};
foreach (string detector in detectorsToExtract)
{
BlockTOFDemodulator demod = new BlockTOFDemodulator();
TOFChannelSet tcs = demod.TOFDemodulateBlock(b, b.detectors.IndexOf(detector), true);
byte[] tcsBytes = serializeAsByteArray(tcs);
DBTOFChannelSet t = new DBTOFChannelSet();
t.tcsData = tcsBytes;
t.detector = detector;
t.FileID = Guid.NewGuid();
dbb.DBTOFChannelSets.Add(t);
}
Controller.log("Demodulated " + fileName);
// add to the database
dc.DBBlocks.InsertOnSubmit(dbb);
dc.SubmitChanges();
Controller.log("Added " + fileName);
}
}
catch (Exception e)
{
Controller.errorLog("Error adding " + fileName);
Controller.errorLog("Error adding block " + path + "\n" + e.StackTrace);
}
finally
{
Monitor.JobFinished();
}
}
