bool loadFile(Log log, string strName, string strFile, DatasetFactory factory, int nTotal, bool bCreateMeanImage, ref int nIdx)
        {
            Stopwatch sw = new Stopwatch();

            log.WriteLine("Loading '" + strName + "' into '" + factory.OpenSource.Name + "'...");

            sw.Start();

            FileStream fs = null;

            try
            {
                fs = new FileStream(strFile, FileMode.Open, FileAccess.Read);
                using (BinaryReader br = new BinaryReader(fs))
                {
                    fs = null;

                    for (int i = 0; i < 10000; i++)
                    {
                        int    nLabel     = (int)br.ReadByte();
                        byte[] rgImgBytes = br.ReadBytes(3072);
                        Bitmap img        = createImage(rgImgBytes);

                        if (m_bCancel)
                        {
                            return(false);
                        }

                        Datum d = ImageData.GetImageDataD(img, 3, false, nLabel);

                        factory.PutRawImageCache(nIdx, d);
                        nIdx++;

                        if (bCreateMeanImage)
                        {
                            m_rgImages.Add(new SimpleDatum(d));
                        }

                        if (sw.ElapsedMilliseconds > 1000)
                        {
                            sw.Stop();
                            log.Progress = (double)nIdx / (double)nTotal;
                            log.WriteLine("Processing " + nIdx.ToString() + " of " + nTotal.ToString());
                            sw.Restart();
                        }
                    }

                    factory.ClearImageCache(true);
                }
            }
            finally
            {
                if (fs != null)
                {
                    fs.Dispose();
                }
            }

            return(true);
        }
Example #2
0
        bool loadData(Log log, DatasetFactory factory, CsvParser parser, List <DataItem> rgData, List <int> rgDim, bool bTraining, bool bCreateImageMean)
        {
            Stopwatch sw = new Stopwatch();

            log.WriteLine("Loading data into '" + factory.OpenSource.Name + "'...");
            sw.Start();

            m_rgImages.Clear();

            int nSize = rgDim[1] / m_schema.CellSize;

            for (int i = 0; i < rgData.Count; i++)
            {
                int    nLabel = rgData[i].Label;
                Bitmap bmp    = createImage(rgData[i].Data, nSize, m_schema.CellSize, m_schema.BinaryValues);

                if (m_bCancel)
                {
                    return(false);
                }

                Datum d = ImageData.GetImageDataD(bmp, rgDim[0], false, nLabel);
                factory.PutRawImageCache(i, d);

                if (bCreateImageMean)
                {
                    m_rgImages.Add(new SimpleDatum(d));
                }

                if (sw.ElapsedMilliseconds > 1000)
                {
                    sw.Stop();
                    log.Progress = (double)i / (double)rgData.Count;
                    log.WriteLine("Processing " + i.ToString() + " of " + rgData.Count.ToString());
                    sw.Restart();
                    factory.ClearImageCache(true);
                }
            }

            factory.ClearImageCache(true);

            return(true);
        }
Example #3
0
        private bool loadFile(string strImagesFile, string strSourceName, int nExtractTotal, ref int nExtractIdx, int nTotal, ref int nIdx, Log log, bool bExtractFiles, Dictionary <string, int> rgNameToLabel, List <Tuple <int, string, Size> > rgFileSizes)
        {
            Stopwatch sw = new Stopwatch();

            reportProgress(nIdx, nTotal, " Source: " + strSourceName);
            reportProgress(nIdx, nTotal, "  loading " + strImagesFile + "...");

            FileStream fs = null;

            try
            {
                int nSrcId = m_factory.AddSource(strSourceName, 3, -1, -1, false);
                addLabels(nSrcId, rgNameToLabel);
                m_factory.Open(nSrcId, 500, Database.FORCE_LOAD.NONE, log);

                int    nPos    = strImagesFile.ToLower().LastIndexOf(".tar");
                string strPath = strImagesFile.Substring(0, nPos);

                if (!Directory.Exists(strPath))
                {
                    Directory.CreateDirectory(strPath);
                }

                if (bExtractFiles)
                {
                    log.Progress = (double)nIdx / nExtractTotal;
                    log.WriteLine("Extracting files from '" + strImagesFile + "'...");

                    if ((nExtractIdx = TarFile.ExtractTar(strImagesFile, strPath, m_evtCancel, log, nExtractTotal, nExtractIdx)) == 0)
                    {
                        log.WriteLine("Aborted.");
                        return(false);
                    }
                }

                // Load the annotations.
                SimpleDatum.ANNOTATION_TYPE type = SimpleDatum.ANNOTATION_TYPE.BBOX;
                int nResizeHeight = 0;
                int nResizeWidth  = 0;

                // Create the training database images.
                // Create the master list file.
                List <Tuple <string, string> > rgFiles = createFileList(log, strPath);

                sw.Start();
                for (int i = 0; i < rgFiles.Count; i++)
                {
                    SimpleDatum datum = loadDatum(log, rgFiles[i].Item1, rgFiles[i].Item2, nResizeHeight, nResizeWidth, type, rgNameToLabel);
                    m_factory.PutRawImageCache(nIdx, datum);
                    nIdx++;

                    if (m_evtCancel.WaitOne(0))
                    {
                        log.WriteLine("Aborted.");
                        return(false);
                    }

                    if (sw.Elapsed.TotalMilliseconds > 1000)
                    {
                        log.Progress = (double)nIdx / nTotal;
                        log.WriteLine("Loading file " + i.ToString() + " of " + rgFiles.Count.ToString() + "...");
                        sw.Restart();
                    }

                    rgFileSizes.Add(new Tuple <int, string, Size>(nIdx, rgFiles[i].Item1, new Size(datum.Width, datum.Height)));
                }

                m_factory.ClearImageCache(true);
                m_factory.Close();
            }
            finally
            {
                if (fs != null)
                {
                    fs.Dispose();
                }
            }

            return(true);
        }
        private bool loadFile(string strImagesFile, string strSourceName, int nTotal, ref int nIdx, Log log)
        {
            Stopwatch sw     = new Stopwatch();
            int       nStart = nIdx;

            reportProgress(nIdx, nTotal, " Source: " + strSourceName);
            reportProgress(nIdx, nTotal, "  loading " + strImagesFile + "...");

            FileStream fs = null;

            try
            {
                fs = new FileStream(strImagesFile, FileMode.Open, FileAccess.Read);
                using (BinaryReader br = new BinaryReader(fs))
                {
                    fs = null;

                    int nSrcId = m_factory.AddSource(strSourceName, 3, 32, 32, false, 0, true);

                    m_factory.Open(nSrcId, 500, Database.FORCE_LOAD.NONE, log);
                    if (nIdx == 0)
                    {
                        m_factory.DeleteSourceData();
                    }

                    sw.Start();

                    for (int i = 0; i < 10000; i++)
                    {
                        int    nLabel     = (int)br.ReadByte();
                        byte[] rgImgBytes = br.ReadBytes(3072);
                        Bitmap img        = createImage(rgImgBytes);

                        Datum d = ImageData.GetImageDataD(img, 3, false, nLabel);

                        m_factory.PutRawImageCache(nIdx, d, 5);
                        m_rgImg.Add(new SimpleDatum(d));

                        nIdx++;

                        if (sw.ElapsedMilliseconds > 1000)
                        {
                            reportProgress(nStart + i, nTotal, "loading " + strImagesFile + "   " + i.ToString("N0") + " of 10,000...");
                            sw.Restart();
                        }

                        if (m_evtCancel.WaitOne(0))
                        {
                            return(false);
                        }
                    }

                    m_factory.ClearImageCache(true);

                    if (nIdx == nTotal)
                    {
                        m_factory.UpdateSourceCounts();
                    }
                }
            }
            finally
            {
                if (fs != null)
                {
                    fs.Dispose();
                }
            }

            return(true);
        }
        private bool loadFile(DatasetFactory factory, List <Tuple <byte[], int> > rgData, int nC, int nH, int nW, string strSourceName, string strExportPath)
        {
            if (strExportPath != null)
            {
                strExportPath += strSourceName;

                if (!Directory.Exists(strExportPath))
                {
                    Directory.CreateDirectory(strExportPath);
                }
            }

            Stopwatch sw = new Stopwatch();

            reportProgress(0, 0, " Source: " + strSourceName);

            try
            {
                if (factory != null)
                {
                    int nSrcId = factory.AddSource(strSourceName, nC, nW, nH, false, 0, true);

                    factory.Open(nSrcId, 500, Database.FORCE_LOAD.NONE, m_log);
                    factory.DeleteSourceData();
                }

                // Storing to database;
                int    nLabel;
                byte[] rgPixels;

                Datum  datum     = new Datum(false, nC, nW, nH, -1, DateTime.MinValue, new List <byte>(), 0, false, -1);
                string strAction = (m_param.ExportToFile) ? "exporing" : "loading";

                reportProgress(0, rgData.Count, "  " + strAction + " a total of " + rgData.Count.ToString() + " items.");
                reportProgress(0, rgData.Count, "   (with rows: " + nH.ToString() + ", cols: " + nW.ToString() + ")");

                sw.Start();

                List <SimpleDatum> rgImg = new List <SimpleDatum>();

                FileStream   fsFileDesc = null;
                StreamWriter swFileDesc = null;
                if (m_param.ExportToFile)
                {
                    string strFile = strExportPath + "\\file_list.txt";
                    fsFileDesc = File.OpenWrite(strFile);
                    swFileDesc = new StreamWriter(fsFileDesc);
                }

                for (int i = 0; i < rgData.Count; i++)
                {
                    rgPixels = rgData[i].Item1;
                    nLabel   = rgData[i].Item2;

                    if (sw.Elapsed.TotalMilliseconds > 1000)
                    {
                        reportProgress(i, rgData.Count, " " + strAction + " data...");
                        sw.Restart();
                    }

                    datum.SetData(rgPixels, nLabel);

                    if (factory != null)
                    {
                        factory.PutRawImageCache(i, datum, 5);
                    }
                    else if (strExportPath != null)
                    {
                        saveToFile(strExportPath, i, datum, swFileDesc);
                    }

                    rgImg.Add(new SimpleDatum(datum));

                    if (m_evtCancel.WaitOne(0))
                    {
                        return(false);
                    }
                }

                if (swFileDesc != null)
                {
                    swFileDesc.Flush();
                    swFileDesc.Close();
                    swFileDesc.Dispose();

                    fsFileDesc.Close();
                    fsFileDesc.Dispose();
                }

                if (factory != null)
                {
                    factory.ClearImageCache(true);
                    factory.UpdateSourceCounts();
                    factory.SaveImageMean(SimpleDatum.CalculateMean(m_log, rgImg.ToArray(), new WaitHandle[] { new ManualResetEvent(false) }), true);
                }

                reportProgress(rgData.Count, rgData.Count, " " + strAction + " completed.");
            }
            finally
            {
            }

            return(true);
        }
Example #6
0
        public uint ConvertData(string strImageFile, string strLabelFile, string strDBPath, string strDBPathMean, bool bCreateImgMean, bool bGetItemCountOnly = false, int nChannels = 1)
        {
            string             strExt;
            List <SimpleDatum> rgImg = new List <SimpleDatum>();

            strExt = Path.GetExtension(strImageFile).ToLower();
            if (strExt == ".gz")
            {
                m_log.WriteLine("Unpacking '" + strImageFile + "'...");
                strImageFile = expandFile(strImageFile);
            }

            strExt = Path.GetExtension(strLabelFile).ToLower();
            if (strExt == ".gz")
            {
                m_log.WriteLine("Unpacking '" + strLabelFile + "'...");
                strLabelFile = expandFile(strLabelFile);
            }

            BinaryFile image_file = new BinaryFile(strImageFile);
            BinaryFile label_file = new BinaryFile(strLabelFile);

            try
            {
                uint magicImg = image_file.ReadUInt32();
                uint magicLbl = label_file.ReadUInt32();

                if (magicImg != 2051)
                {
                    if (m_log != null)
                    {
                        m_log.FAIL("Incorrect image file magic.");
                    }

                    if (OnLoadError != null)
                    {
                        OnLoadError(this, new LoadErrorArgs("Incorrect image file magic."));
                    }
                }

                if (magicLbl != 2049)
                {
                    if (m_log != null)
                    {
                        m_log.FAIL("Incorrect label file magic.");
                    }

                    if (OnLoadError != null)
                    {
                        OnLoadError(this, new LoadErrorArgs("Incorrect label file magic."));
                    }
                }

                uint num_items  = image_file.ReadUInt32();
                uint num_labels = label_file.ReadUInt32();

                if (num_items != num_labels)
                {
                    if (m_log != null)
                    {
                        m_log.FAIL("The number of items must equal the number of labels.");
                    }

                    throw new Exception("The number of items must equal the number of labels." + Environment.NewLine + "  Label File: '" + strLabelFile + Environment.NewLine + "  Image File: '" + strImageFile + "'.");
                }

                if (bGetItemCountOnly)
                {
                    return(num_items);
                }

                uint rows = image_file.ReadUInt32();
                uint cols = image_file.ReadUInt32();

                int nSrcId = m_factory.AddSource(strDBPath, nChannels, (int)cols, (int)rows, false, 0, true);
                m_factory.Open(nSrcId, 500, Database.FORCE_LOAD.FROM_FILE); // use file based data.
                m_factory.DeleteSourceData();

                // Storing to db
                byte[] rgLabel;
                byte[] rgPixels;

                Datum datum = new Datum(false, nChannels, (int)cols, (int)rows);

                if (m_log != null)
                {
                    m_log.WriteHeader("LOADING " + strDBPath + " items.");
                    m_log.WriteLine("A total of " + num_items.ToString() + " items.");
                    m_log.WriteLine("Rows: " + rows.ToString() + " Cols: " + cols.ToString());
                }

                if (OnLoadStart != null)
                {
                    OnLoadStart(this, new LoadStartArgs((int)num_items));
                }

                for (int item_id = 0; item_id < num_items; item_id++)
                {
                    rgPixels = image_file.ReadBytes((int)(rows * cols));
                    rgLabel  = label_file.ReadBytes(1);

                    List <byte> rgData = new List <byte>(rgPixels);

                    if (nChannels == 3)
                    {
                        rgData.AddRange(new List <byte>(rgPixels));
                        rgData.AddRange(new List <byte>(rgPixels));
                    }

                    datum.SetData(rgData, (int)rgLabel[0]);

                    if (m_bmpTargetOverlay != null)
                    {
                        datum = createTargetOverlay(datum);
                    }

                    m_factory.PutRawImageCache(item_id, datum);

                    if (bCreateImgMean)
                    {
                        rgImg.Add(new SimpleDatum(datum));
                    }

                    if ((item_id % 1000) == 0)
                    {
                        if (m_log != null)
                        {
                            m_log.WriteLine("Loaded " + item_id.ToString("N") + " items...");
                            m_log.Progress = (double)item_id / (double)num_items;
                        }

                        if (OnLoadProgress != null)
                        {
                            LoadArgs args = new LoadArgs(item_id);
                            OnLoadProgress(this, args);

                            if (args.Cancel)
                            {
                                break;
                            }
                        }
                    }
                }

                m_factory.ClearImageCache(true);
                m_factory.UpdateSourceCounts();

                if (bCreateImgMean)
                {
                    if (strDBPath != strDBPathMean)
                    {
                        m_factory.CopyImageMean(strDBPathMean, strDBPath);
                    }
                    else
                    {
                        m_log.WriteLine("Creating image mean...");
                        SimpleDatum dMean = SimpleDatum.CalculateMean(m_log, rgImg.ToArray(), new WaitHandle[] { new ManualResetEvent(false) });
                        m_factory.PutRawImageMean(dMean, true);
                    }
                }

                if (OnLoadProgress != null)
                {
                    LoadArgs args = new LoadArgs((int)num_items);
                    OnLoadProgress(this, args);
                }

                return(num_items);
            }
            finally
            {
                image_file.Dispose();
                label_file.Dispose();
            }
        }