/*!
* \brief Constructor to load external csv-File as soil database.
*
* \param soilDbFileStream A file stream to read csv data from.
*
* \code{.unparsed}
* 'create filestream for csv data file
* Dim fs As System.IO.FileStream = New IO.FileStream("C:\DHI\MIKE-Basin_SoilData.csv", IO.FileMode.Open)
* 'create new soilDb
* Dim soilDb As atbApi.data.SoilDb = New atbApi.data.SoilDb(fs)
* 'important: close fileStream after SoilDb is created
* fs.Close()
* 'create new soil and provide your own soilDb to constructor
* Dim mySoil As atbApi.data.Soil = New atbApi.data.Soil("soilname_from_csv_data", soilDb)
* \endcode
*/
public SoilDb(Stream soilDbFileStream)
{
this.soilDbFileStream = soilDbFileStream;
CsvReader csvReader = new CsvReader(soilDbFileStream);
while (!csvReader.EndOfStream())
{
IDictionary <String, String> fields;
fields = csvReader.readLine();
if (fields == null || !fields.ContainsKey("dataObjName") || String.IsNullOrEmpty(fields["dataObjName"]))
{
continue;
}
String name = fields["dataObjName"];
if (!soilData.ContainsKey(name))
{
soilData.Add(name, new Dictionary <Double, SoilValues>());
}
IDictionary <Double, SoilValues> soilValues = soilData[name];
SoilValues values = new SoilValues();
values.parseData(fields);
Double _iterator = Math.Round(Double.Parse(fields["_iterator.z"], CultureInfo.InvariantCulture), 2, MidpointRounding.AwayFromZero);
soilValues.Add(_iterator, values);
if (!maxDepth.ContainsKey(name))
{
maxDepth[name] = _iterator;
}
else
{
maxDepth[name] = Math.Max(maxDepth[name], _iterator);
}
}
}
private int loadCsv(Stream stream)
{
try
{
_e = null;
CsvReader csvReader = new CsvReader(stream);
while (!csvReader.EndOfStream())
{
IDictionary <String, String> fields;
fields = csvReader.readLine();
if (fields == null || !fields.ContainsKey("dataObjName") || String.IsNullOrEmpty(fields["dataObjName"]))
{
continue;
}
if (String.IsNullOrEmpty(_name))
{
_name = fields["dataObjName"];
}
if (fields.ContainsKey("dataObjId") && String.IsNullOrEmpty(_dataObjId) && !String.IsNullOrEmpty(fields["dataObjId"]))
{
_dataObjId = fields["dataObjId"];
}
//avoid to mix multiple stations, but for "nearest" it is nessecary
//if (!_name.Equals(fields["dataObjName"])) continue;
ClimateValues values = new ClimateValues();
values.parseData(fields, _cultureInfo == null ? CultureInfo.InvariantCulture : _cultureInfo);
if (!fields.ContainsKey("_iterator.date"))
{
continue;
}
DateTime _iterator = DateTime.Parse(fields["_iterator.date"], _cultureInfo == null ? CultureInfo.InvariantCulture : _cultureInfo);
if (_step != TimeStep.day)
{
addValues(_iterator, convertTimeStep(values, Tools.AdjustTimeStep(_iterator, this.step), this.step, TimeStep.day));
}
else
{
addValues(_iterator, values);
}
}
return(climateData.Count);
}
catch (Exception e)
{
_e = e;
return(0);
}
}
private int loadCsv(Stream stream)
{
try
{
_e = null;
CsvReader csvReader = new CsvReader(stream);
while (!csvReader.EndOfStream())
{
IDictionary <String, String> fields;
fields = csvReader.readLine();
if (fields == null || (
(!fields.ContainsKey("dataObjName") || String.IsNullOrEmpty(fields["dataObjName"])) &&
(!fields.ContainsKey("_id") || String.IsNullOrEmpty(fields["_id"]))
))
{
continue;
}
if (String.IsNullOrEmpty(_name))
{
_name = fields.ContainsKey("dataObjName") ? fields["dataObjName"] : fields["_id"];
}
if (fields.ContainsKey("dataObjId") && String.IsNullOrEmpty(_dataObjId) && !String.IsNullOrEmpty(fields["dataObjId"]))
{
_dataObjId = fields["dataObjId"];
}
RainPatternValues values = new RainPatternValues();
values.parseData(fields, _cultureInfo == null ? CultureInfo.InvariantCulture : _cultureInfo);
//month and sum are required
if (!fields.ContainsKey("month") || !fields.ContainsKey("sum"))
{
continue;
}
addValues(values.month, values.sum, values);
}
return(rainPatternData.Count);
}
catch (Exception e)
{
_e = e;
return(0);
}
}
/*!
* \brief Constructor to load external csv-File as plant database.
*
* \param plantDbFileStream A file stream to read csv data from.
*
* \code{.unparsed}
* 'create filestream for csv data file
* Dim fs As System.IO.FileStream = New IO.FileStream("C:\DHI\MIKE-Basin_PlantData.csv", IO.FileMode.Open)
* 'create new plantDb
* Dim plantDb As atbApi.data.PlantDb = New atbApi.data.PlantDb(fs)
* 'important: close fileStream after PlantDb is created
* fs.Close()
* 'create new plant and provide your own plantDb to constructor
* Dim myPlant As atbApi.data.Plant = New atbApi.data.Plant("CROPWAT_80_Crop_data_CITRUS_70p_ca_bare", plantDb)
* \endcode
*/
public PlantDb(Stream plantDbFileStream, CultureInfo cultureInfo = null)
{
this.plantDbFileStream = plantDbFileStream;
CsvReader csvReader = new CsvReader(plantDbFileStream);
while (!csvReader.EndOfStream())
{
IDictionary <String, String> fields;
fields = csvReader.readLine();
//Debug.WriteLine(fields["dataObjName"] + " day: " + fields["_iterator.day"]);
if (fields == null || !fields.ContainsKey("dataObjName") || String.IsNullOrEmpty(fields["dataObjName"]))
{
continue;
}
String name = fields["dataObjName"];
if (!plantData.ContainsKey(name))
{
plantData.Add(name, new Dictionary <int, PlantValues>());
plantStagesLength.Add(name, 0);
initialEnd.Add(name, 0);
}
IDictionary <int, PlantValues> plantValues = plantData[name];
PlantValues values = new PlantValues();
values.parseData(fields, cultureInfo != null ? cultureInfo : CultureInfo.InvariantCulture);
int _iterator = Int32.Parse(fields["_iterator.day"], cultureInfo != null ? cultureInfo : CultureInfo.InvariantCulture);
plantValues.Add(_iterator, values);
plantStagesLength[name] = Math.Max(plantStagesLength[name], _iterator);
if (values.stage.Equals(PlantStage.initial))
{
if (!initialEnd.ContainsKey(name))
{
initialEnd[name] = 0;
}
initialEnd[name] = Math.Max(initialEnd[name], _iterator);
}
if (values.stage.Equals(PlantStage.development))
{
if (!developmentEnd.ContainsKey(name))
{
developmentEnd[name] = 0;
}
developmentEnd[name] = Math.Max(developmentEnd[name], _iterator);
}
}
}
private static async Task <int> InitializeInstance(String tag = null)
{
climateIds.Clear();
climateInstances.Clear();
CsvReader csvReader = new CsvReader(await WebApiRequest.LoadClimateIdsFromATBWebService(tag));
while (!csvReader.EndOfStream())
{
IDictionary <String, String> fields;
fields = csvReader.readLine();
if (String.IsNullOrEmpty(fields["name"]) || String.IsNullOrEmpty(fields["_id"]))
{
continue;
}
climateIds.Add(fields["name"], fields["_id"]);
}
return(climateIds.Count);
}
private int loadCsv(Stream stream)
{
try
{
_e = null;
CsvReader csvReader = new CsvReader(stream);
while (!csvReader.EndOfStream())
{
IDictionary <String, String> fields;
fields = csvReader.readLine();
if (fields == null || !fields.ContainsKey("dataObjName") || String.IsNullOrEmpty(fields["dataObjName"]))
{
continue;
}
if (String.IsNullOrEmpty(_name))
{
_name = fields["dataObjName"];
}
if (fields.ContainsKey("dataObjId") && String.IsNullOrEmpty(_dataObjId) && !String.IsNullOrEmpty(fields["dataObjId"]))
{
_dataObjId = fields["dataObjId"];
}
CropSequenceValues values = new CropSequenceValues();
//catch parse exception and continue reading file
try
{
values.parseData(fields, _cultureInfo == null ? CultureInfo.InvariantCulture : _cultureInfo, pdb: plantDb, sdb: soilDb, cdb: climateDb, rpdb: rainPatternDb);
}
catch (Exception e)
{
_e = e;
continue;
}
bool fieldMissing = false;
foreach (String requiredField in requiredFields)
{
if (!fields.ContainsKey(requiredField))
{
fieldMissing = true;
break;
}
}
if (fieldMissing)
{
continue;
}
addValues(values);
}
return(cropSequenceData.Count);
}
catch (Exception e)
{
_e = e;
return(0);
}
}
