void ensureSingleConnectedStructure(ConnectionGeneList connections, List <PointF> hiddenNeurons, Dictionary <long, PointF> conSourcePoints, Dictionary <long, PointF> conTargetPoints)
{
List <List <long> > allChains = new List <List <long> >();
int maxChain = 0;
foreach (var con in connections)
{
bool isInChain = false;
List <long> nChain = null;
foreach (List <long> chain in allChains)
{
maxChain = Math.Max(chain.Count, maxChain);
if (chain.Contains(con.SourceNeuronId) || chain.Contains(con.TargetNeuronId))
{
nChain = chain;
isInChain = true;
break;
}
}
if (!isInChain)
{
nChain = new List <long>();
allChains.Add(nChain);
}
if (!nChain.Contains(con.SourceNeuronId))
{
nChain.Add(con.SourceNeuronId);
}
if (!nChain.Contains(con.TargetNeuronId))
{
nChain.Add(con.TargetNeuronId);
}
}
List <long> finalChain = allChains.Find(chain => chain.Count == maxChain);
if (finalChain != null && finalChain.Count != 0)
{
List <ConnectionGene> markDelete = new List <ConnectionGene>();
foreach (var conn in connections)
{
bool delete = false;
//if we don't have you in our chain, get rid of the object
if (!finalChain.Contains(conn.SourceNeuronId))
{
hiddenNeurons.Remove(conSourcePoints[conn.InnovationId]);
delete = true;
}
if (!finalChain.Contains(conn.TargetNeuronId))
{
hiddenNeurons.Remove(conTargetPoints[conn.InnovationId]);
delete = true;
}
if (delete)
{
markDelete.Add(conn);
}
}
markDelete.ForEach(x => connections.Remove(x));
//connections.RemoveAll(x => !(finalChain.Contains(x.SourceNeuronId) || finalChain.Contains(x.TargetNeuronId)));
//hiddenNeurons.RemoveAll(hn =>
}
connections.ForEach(con =>
{
//readjust connection source/target depending on hiddenNeuron array
PointF point = conSourcePoints[con.InnovationId];
con.SourceNeuronId = hiddenNeurons.FindIndex(hp => hp.X == point.X && hp.Y == point.Y);
if (con.SourceNeuronId == -1)
{
Console.WriteLine("Adjusted con src- " + con.SourceNeuronId + " tgt- " + con.TargetNeuronId);
}
point = conTargetPoints[con.InnovationId];
con.TargetNeuronId = hiddenNeurons.FindIndex(hp => hp.X == point.X && hp.Y == point.Y);
if (con.TargetNeuronId == -1)
{
Console.WriteLine("Adjusted con src- " + con.SourceNeuronId + " tgt- " + con.TargetNeuronId);
}
});
}
void ensureSingleConnectedStructure(ConnectionGeneList connections, List<PointF> hiddenNeurons, Dictionary<long, PointF> conSourcePoints, Dictionary<long, PointF> conTargetPoints)
{
List<List<long>> allChains = new List<List<long>>();
int maxChain = 0;
foreach (var con in connections)
{
bool isInChain = false;
List<long> nChain = null;
foreach (List<long> chain in allChains)
{
maxChain = Math.Max(chain.Count, maxChain);
if (chain.Contains(con.SourceNeuronId) || chain.Contains(con.TargetNeuronId))
{
nChain = chain;
isInChain = true;
break;
}
}
if (!isInChain)
{
nChain = new List<long>();
allChains.Add(nChain);
}
if (!nChain.Contains(con.SourceNeuronId))
nChain.Add(con.SourceNeuronId);
if (!nChain.Contains(con.TargetNeuronId))
nChain.Add(con.TargetNeuronId);
}
List<long> finalChain = allChains.Find(chain => chain.Count == maxChain);
if (finalChain != null && finalChain.Count != 0)
{
List<ConnectionGene> markDelete = new List<ConnectionGene>();
foreach (var conn in connections)
{
bool delete = false;
//if we don't have you in our chain, get rid of the object
if (!finalChain.Contains(conn.SourceNeuronId))
{
hiddenNeurons.Remove(conSourcePoints[conn.InnovationId]);
delete = true;
}
if (!finalChain.Contains(conn.TargetNeuronId))
{
hiddenNeurons.Remove(conTargetPoints[conn.InnovationId]);
delete = true;
}
if (delete)
markDelete.Add(conn);
}
markDelete.ForEach(x => connections.Remove(x));
//connections.RemoveAll(x => !(finalChain.Contains(x.SourceNeuronId) || finalChain.Contains(x.TargetNeuronId)));
//hiddenNeurons.RemoveAll(hn =>
}
connections.ForEach(con =>
{
//readjust connection source/target depending on hiddenNeuron array
PointF point = conSourcePoints[con.InnovationId];
con.SourceNeuronId = hiddenNeurons.FindIndex(hp => hp.X == point.X && hp.Y == point.Y);
if (con.SourceNeuronId == -1)
Console.WriteLine("Adjusted con src- " + con.SourceNeuronId + " tgt- " + con.TargetNeuronId);
point = conTargetPoints[con.InnovationId];
con.TargetNeuronId = hiddenNeurons.FindIndex(hp => hp.X == point.X && hp.Y == point.Y);
if (con.TargetNeuronId == -1)
Console.WriteLine("Adjusted con src- " + con.SourceNeuronId + " tgt- " + con.TargetNeuronId);
});
}
