public void TestConstructAndRun()
{
string inputFile = @"\TestUtils\HpcInput.txt";
string outputFile = @"\TestUtils\results.txt";
string assemblypath = System.IO.Path.GetDirectoryName(System.Reflection.Assembly.GetExecutingAssembly().GetName().CodeBase).Substring(6);
string inputFilePath = assemblypath + inputFile;
FileInfo fileInfo = new FileInfo(assemblypath + outputFile);
if (fileInfo.Exists)
{
fileInfo.Delete();
}
string[] args = { "-InputFile", "InputFile((\"" + inputFilePath + "\"))", "-Operator", "Sum" };
CommandArguments.ConstructAndRun <AggregateNumbers>(args);
FileStream fs = fileInfo.OpenRead();
byte[] buffer = new byte[2];
fs.Read(buffer, 0, 2);
System.Text.ASCIIEncoding enc = new System.Text.ASCIIEncoding();
Assert.AreEqual(enc.GetString(buffer), "15");
}
public void ValidateConstructAndRunT()
{
string fileName = Path.GetTempFileName();
fileName = fileName.Replace(Path.GetTempPath(), "");
string[] args = { fileName, "Sum" };
CommandArguments.ConstructAndRun <AggregateNumbers>(args);
}
static void Main(string[] args)
{
try
{
Console.WriteLine(args.StringJoin(" "));
CommandArguments.ConstructAndRun <Distribute>(args);
}
catch (Exception e)
{
Console.Error.WriteLine(e);
Environment.ExitCode = -532462766; // general failure.
}
}
/// <summary>
/// Main method
/// Sample args :-InputFile InputFile("(C:\Temp\hpc.fasta)")
/// Sample args with distribute: -Distribute OnHpcAndWait(MSR-L25-DEV29,26,Priority:AboveNormal,IsExclusive:True) -InputFile InputFile("(\\MSR-L25-DEV29\scratch\Bio.HPC\hpc.fasta)")
/// </summary>
/// <param name="args"></param>
static void Main(string[] args)
{
Console.Error.WriteLine(Properties.Resources.SampleClusterApp_Splash);
try
{
CommandArguments.ConstructAndRun <SequenceContent>(args, false);
}
catch (HelpException)
{
Console.Error.WriteLine(Properties.Resources.SampleClusterApp_Help);
Environment.ExitCode = 10022;
}
catch (Exception e)
{
Console.Error.WriteLine(e);
Environment.ExitCode = -532462766; // general failure.
}
}
/// <summary>
/// main method
/// </summary>
/// <param name="args">arguments</param>
static void Main(string[] args)
{
Console.Error.WriteLine(Resources.DistributeApp_SplashScreen);
try
{
CommandArguments.ConstructAndRun <Distribute>(args, false);
}
catch (HelpException)
{
Console.Error.WriteLine(Properties.Resources.DistributeApp_Help);
Environment.ExitCode = 10022;
}
catch (Exception e)
{
Console.Error.WriteLine(e);
Environment.ExitCode = -532462766; // general failure.
}
}
/// <summary>
/// Main method
/// Sample args :-InputFile InputFile("(C:\Temp\hpc.fasta)")
/// Sample args with distribute: -Distribute OnHpcAndWait(MSR-L25-DEV29,26,Priority:AboveNormal,IsExclusive:True) -InputFile InputFile("(\\MSR-L25-DEV29\scratch\Bio.HPC\hpc.fasta)")
/// </summary>
/// <param name="args"></param>
static void Main(string[] args)
{
Console.WriteLine(SplashString());
CommandArguments.ConstructAndRun <SequenceContent>(args);
}
static void Main(string[] args)
{
CommandArguments.ConstructAndRun <AggregateNumbers>(args);
}
static void Main(string[] args)
{
CommandArguments.ConstructAndRun <ConPADE>(args);
}