void Start()
{
breeding = GameObject.FindWithTag("Breeding").GetComponent <Breeding> ();
chromo1 = new List <Chromosome> ();
chromo2 = new List <Chromosome> ();
for (int i = 0; i < chromoCount; i++)
{
Chromosome newChromosome = new Chromosome();
for (int j = 0; j < genes.Count; j++)
{
newChromosome.AddToGeneList(genes [j]);
}
chromo1.Add(newChromosome);
}
for (int i = 0; i < chromoCount; i++)
{
Chromosome newChromosome = new Chromosome();
for (int j = 0; j < genes.Count; j++)
{
newChromosome.AddToGeneList(genes [j]);
}
chromo2.Add(newChromosome);
}
animal.SetChromosomes(chromo1, chromo2);
}
public static void GetAnimalData(out Animal animal, string fileName, string animalName)
{
bool debug = false;
if (debug)
{
Debug.Log("Get Animal Data... Animal Name: " + animalName + ", File Name: " + fileName);
}
// Get gene information from Reference.cs
int numChromosomes = References.instance.numChromosomes;
int[] numGenes = References.instance.numGenes;
int numMitoGenes = References.instance.numMitoGenes;
int numGenderGenes = References.instance.numGenderGenes;
TextAsset xmlAsset = Resources.Load(fileName, typeof(TextAsset)) as TextAsset;
MemoryStream memStream = new MemoryStream(xmlAsset.bytes);
XmlTextReader CReader = new XmlTextReader(memStream);
animal = new Animal();
animal.name = animalName;
List <Chromosome> femaleList = new List <Chromosome> ();
List <Chromosome> maleList = new List <Chromosome> ();
List <Chromosome> mitoList = new List <Chromosome> ();
Chromosome chromosome = new Chromosome();
Gene gene = new Gene();
bool foundAnimal = false;
int gender = 0;
while (CReader.Read())
{
// While data is relevant...
if (CReader.Name != "" &&
CReader.NodeType != XmlNodeType.EndElement &&
CReader.Name != "xml" &&
foundAnimal)
{
if (CReader.Name == "FemaleList")
{
if (debug)
{
Debug.Log("Found female list");
}
for (int i = 0; i < numChromosomes + 1; i++) // chromosome count
{
CReader.Read(); CReader.Read();
if (i < numChromosomes)
{
chromosome = new Chromosome();
if (debug)
{
Debug.Log("(F) Create new Chromosome");
}
for (int j = 0; j < numGenes[i]; j++) // gene count
{
CReader.Read(); CReader.Read();
gene = new Gene();
if (debug)
{
Debug.Log("(F) Create new Gene");
}
gene.parentOrigin = CReader.GetAttribute("Parent");
gene.name = CReader.GetAttribute("Name");
gene.allele = float.Parse(CReader.GetAttribute("Allele"));
gene.unityID = int.Parse(CReader.GetAttribute("UnityID"));
gene.geneNum = int.Parse(CReader.GetAttribute("GeneID"));
gene.whichChromosomeGroup = int.Parse(CReader.GetAttribute("CGroup"));
gene.whichChromosome = int.Parse(CReader.GetAttribute("CSpecific"));
gene.positionWithinChromosome = int.Parse(CReader.GetAttribute("CPosition"));
gene.gender = 0;
chromosome.AddToGeneList(gene);
}
femaleList.Add(chromosome);
if (debug)
{
Debug.Log("Female List: " + femaleList.Count + " : " + femaleList [i].GetGeneList().Count);
}
}
else
{
if (CReader.Name == "X")
{
gender = 0;
}
else
{
gender = 1;
}
chromosome = new Chromosome();
if (debug)
{
Debug.Log("(F) Create new Chromosome");
}
for (int j = 0; j < numGenderGenes; j++) // gene count
{
CReader.Read(); CReader.Read();
gene = new Gene();
if (debug)
{
Debug.Log("(F) Create new Gene");
}
gene.parentOrigin = CReader.GetAttribute("Parent");
gene.name = CReader.GetAttribute("Name");
gene.allele = float.Parse(CReader.GetAttribute("Allele"));
gene.unityID = int.Parse(CReader.GetAttribute("UnityID"));
gene.geneNum = int.Parse(CReader.GetAttribute("GeneID"));
gene.whichChromosomeGroup = int.Parse(CReader.GetAttribute("CGroup"));
gene.whichChromosome = int.Parse(CReader.GetAttribute("CSpecific"));
gene.positionWithinChromosome = int.Parse(CReader.GetAttribute("CPosition"));
gene.gender = gender;
chromosome.AddToGeneList(gene);
}
femaleList.Add(chromosome);
if (debug)
{
Debug.Log("X Chromosome List: " + femaleList.Count + " : " + femaleList [numChromosomes].GetGeneList().Count);
}
}
CReader.Read(); CReader.Read();
}
}
if (CReader.Name == "MaleList")
{
if (debug)
{
Debug.Log("Found male list");
}
for (int i = 0; i < numChromosomes + 1; i++)
{
CReader.Read(); CReader.Read();
if (i < numChromosomes)
{
chromosome = new Chromosome();
if (debug)
{
Debug.Log("(M) Create new Chromosome");
}
for (int j = 0; j < numGenes[i]; j++) // gene count
{
CReader.Read();
CReader.Read();
gene = new Gene();
if (debug)
{
Debug.Log("(M) Create new Gene");
}
gene.parentOrigin = CReader.GetAttribute("Parent");
gene.name = CReader.GetAttribute("Name");
gene.allele = float.Parse(CReader.GetAttribute("Allele"));
gene.unityID = int.Parse(CReader.GetAttribute("UnityID"));
gene.geneNum = int.Parse(CReader.GetAttribute("GeneID"));
gene.whichChromosomeGroup = int.Parse(CReader.GetAttribute("CGroup"));
gene.whichChromosome = int.Parse(CReader.GetAttribute("CSpecific"));
gene.positionWithinChromosome = int.Parse(CReader.GetAttribute("CPosition"));
gene.gender = 0;
chromosome.AddToGeneList(gene);
}
maleList.Add(chromosome);
if (debug)
{
Debug.Log("Male List: " + maleList.Count + " : " + maleList [0].GetGeneList().Count);
}
}
else
{
if (CReader.Name == "X")
{
gender = 0;
}
else
{
gender = 1;
}
chromosome = new Chromosome();
if (debug)
{
Debug.Log("(F) Create new Chromosome");
}
for (int j = 0; j < numGenderGenes; j++) // gene count
{
CReader.Read(); CReader.Read();
gene = new Gene();
if (debug)
{
Debug.Log("(F) Create new Gene");
}
gene.parentOrigin = CReader.GetAttribute("Parent");
gene.name = CReader.GetAttribute("Name");
gene.allele = float.Parse(CReader.GetAttribute("Allele"));
gene.unityID = int.Parse(CReader.GetAttribute("UnityID"));
gene.geneNum = int.Parse(CReader.GetAttribute("GeneID"));
gene.whichChromosomeGroup = int.Parse(CReader.GetAttribute("CGroup"));
gene.whichChromosome = int.Parse(CReader.GetAttribute("CSpecific"));
gene.positionWithinChromosome = int.Parse(CReader.GetAttribute("CPosition"));
gene.gender = gender;
chromosome.AddToGeneList(gene);
}
maleList.Add(chromosome);
if (debug)
{
Debug.Log("Y Chromosome List: " + maleList.Count + " : " + maleList [numChromosomes].GetGeneList().Count);
}
}
CReader.Read(); CReader.Read();
}
}
if (CReader.Name == "Mitochondrial")
{
if (debug)
{
Debug.Log("Found mitochondrial");
}
CReader.Read(); CReader.Read();
chromosome = new Chromosome();
if (debug)
{
Debug.Log("(M) Create new Mito Chromosome");
}
for (int j = 0; j < numMitoGenes; j++) // gene count
{
CReader.Read(); CReader.Read();
gene = new Gene();
if (debug)
{
Debug.Log("(M) Create new Mito Gene");
}
gene.parentOrigin = CReader.GetAttribute("Parent");
gene.name = CReader.GetAttribute("Name");
gene.allele = float.Parse(CReader.GetAttribute("Allele"));
gene.unityID = int.Parse(CReader.GetAttribute("UnityID"));
gene.geneNum = int.Parse(CReader.GetAttribute("GeneID"));
gene.whichChromosomeGroup = int.Parse(CReader.GetAttribute("CGroup"));
gene.whichChromosome = int.Parse(CReader.GetAttribute("CSpecific"));
gene.positionWithinChromosome = int.Parse(CReader.GetAttribute("CPosition"));
gene.gender = 0;
chromosome.AddToGeneList(gene);
}
mitoList.Add(chromosome);
if (debug)
{
Debug.Log("Mito List: " + mitoList.Count + " : " + mitoList[0].GetGeneList().Count);
}
CReader.Read(); CReader.Read();
}
}
if (CReader.Name == animalName)
{
foundAnimal = true;
if (debug)
{
Debug.Log("Found Animal");
}
}
}
animal.SetChromosomes(femaleList, maleList);
animal.mitochondrial = mitoList [0];
animal.gender = gender;
animal.InitializeStoredTraitList();
animal.InitializeBlendshapesDict();
// Set the animal's blends without using a gameObject - not sure why I did this. Commented out: 8/1/2018, worked on animal colors with new animal rig
//foreach (Trait trait in References.instance.traitList.GetTraitList())
//{
// trait.ModifyAnimal (animal, femaleList, maleList);
//}
if (debug)
{
Debug.Log("Female Totals: Chromosomes - " + femaleList.Count + ", Genes (first chromosome) - " + femaleList[0].GetGeneList().Count);
}
if (debug)
{
Debug.Log("Special Chromosome (Female) Genes - " + femaleList[numChromosomes].GetGeneList().Count);
}
if (debug)
{
Debug.Log("Male Totals: Chromosomes - " + maleList.Count + ", Genes (first chromosome) - " + maleList[0].GetGeneList().Count);
}
if (debug)
{
Debug.Log("Special Chromosome (Male) Genes - " + maleList[numChromosomes].GetGeneList().Count);
}
if (debug)
{
Debug.Log("Mitochondrial Chromosome - " + animal.mitochondrial + ", Genes (first chromosome) - " + animal.mitochondrial.GetGeneList().Count);
}
if (debug)
{
Debug.Log("...");
}
CReader.Close();
}