public MainWindow() : base(Gtk.WindowType.Toplevel)
{
Build();
m_Software.Name = "PAnalyzer";
m_Software.Version = "1.1";
m_Software.License = "Released under the GNU General Public License";
m_Software.Copyright = "(c) 2010-2014 by UPV/EHU";
m_Software.Contact = "*****@*****.**";
m_Software.Customizations = "No customizations";
m_Software.Url = "https://code.google.com/p/ehu-bio/wiki/PAnalyzer";
m_dlgOpen = new Gtk.FileChooserDialog(
"Select data file ...", this, FileChooserAction.Open,
Stock.Open, ResponseType.Ok, Stock.Cancel, ResponseType.Cancel);
m_dlgOpen.Filter = new FileFilter();
m_dlgOpen.Filter.AddPattern("*.xml");
m_dlgOpen.Filter.AddPattern("*.mzid");
m_dlgOpen.SelectMultiple = true;
m_LastDir = ".";
m_dlgSave = new Gtk.FileChooserDialog(
"Select data file ...", this, FileChooserAction.Save,
Stock.SaveAs, ResponseType.Ok, Stock.Cancel, ResponseType.Cancel);
m_dlgSave.Filter = new FileFilter();
m_dlgSave.Filter.AddPattern("*.csv");
m_dlgSave.Filter.AddPattern("*.mzid");
ProteinsView.AppendColumn("ID", new CellRendererText(), "text", 0);
ProteinsView.AppendColumn("Entry", new CellRendererText(), "text", 1);
ProteinsView.AppendColumn("Accession", new CellRendererText(), "text", 2);
ProteinsView.AppendColumn("Evidence", new CellRendererText(), "text", 3);
ProteinsView.AppendColumn("Description", new CellRendererText(), "text", 4);
ProteinsView.CursorChanged += OnProteinSelected;
PeptidesView.AppendColumn("ID", new CellRendererText(), "text", 0);
PeptidesView.AppendColumn("Confidence", new CellRendererText(), "text", 1);
PeptidesView.AppendColumn("Relation", new CellRendererText(), "text", 2);
PeptidesView.AppendColumn("Sequence", new CellRendererText(), "text", 3);
PeptidesView.CursorChanged += OnPeptideSelected;
m_dlgPrefs = new PreferencesDlg();
m_dlgPrefs.PlgsThreshold = Peptide.ConfidenceType.Yellow;
m_dlgPrefs.SeqThreshold = Peptide.ConfidenceType.Yellow;
m_dlgPrefs.XTandemTh = 0.05;
m_dlgPrefs.PassTh = true;
m_dlgPrefs.RankTh = 0;
m_dlgPrefs.Runs = 1;
m_dlgPrefs.Hide();
m_dlgAbout = new AboutDlg();
m_dlgAbout.Version = m_Software.Name + " v" + m_Software.Version;
m_dlgAbout.License = m_Software.License;
m_dlgAbout.Copyright = m_Software.Copyright;
m_dlgAbout.Hide();
/*Log.Text = "".PadRight(80,'*');
* WriteLog( m_Version );
* WriteLog( m_License );
* WriteLog( m_Copyright );
* WriteLog( "\n".PadLeft(80,'*') );*/
//preferencesAction.Sensitive = true;
dialogInfoAction.Sensitive = true;
State = States.EMPTY;
m_Mapper = null;
m_nFiles = 0;
}
protected virtual void OnDialogInfoActionActivated(object sender, System.EventArgs e)
{
m_dlgAbout.Run();
m_dlgAbout.Hide();
}
