public void CalDissimiliraty(SequenceData seqX, SequenceData seqY, Result result, int k, int m = 0)
{
foreach (var cal in _listFun)
{
cal(seqX, seqY, result, k, m);
}
}
private void CalCh(SequenceData seqX, SequenceData seqY, Result result, int k, int m = 0)
{
//public
double fXi = 0;
double fYi = 0;
double cXi = 0;
double cYi = 0;
//Ch
double resultCh = 0;
double tmpCh = 0;
List <int> listKtupleX = seqX.GetKtupleData(k);
int totalX = seqX.GetTotal(k);
List <int> listKtupleY = seqY.GetKtupleData(k);
int totalY = seqY.GetTotal(k);
for (int i = 0; i < listKtupleX.Count; i++)
{
//public
cXi = listKtupleX[i];
cYi = listKtupleY[i];
fXi = cXi / totalX;
fYi = cYi / totalY;
//Ch
tmpCh = Math.Abs(fXi - fYi);
resultCh = tmpCh > resultCh ? tmpCh : resultCh;
}
//Ch
SaveResult("Ch_k" + k, seqX, seqY, result, resultCh);
//result.AddToMatrix("Ch_k" + k, seqX.ID, seqY.ID, resultCh);
//result.AddToMatrix("Ch_k" + k, seqY.ID, seqX.ID, resultCh);
}
private void CalD2Star(SequenceData seqX, SequenceData seqY, Result result, int k, int m)
{
if (k < 3 || k == m)
{
return;
}
//public
List <int> listKtupleX = seqX.GetKtupleData(k);
List <double> listPosX = seqX.GetMarkovData(k, m);
double totalX = seqX.GetTotal(k);
List <int> listKtupleY = seqY.GetKtupleData(k);
List <double> listPosY = seqY.GetMarkovData(k, m);
double totalY = seqY.GetTotal(k);
//D2Star
double tmpXD2Star = 0;
double tmpYD2Star = 0;
double resultD2Star = 0;
for (int i = 0; i < listKtupleX.Count; i++)
{
//public
double cXi = listKtupleX[i];
double cYi = listKtupleY[i];
double pXi = listPosX[i];
double pYi = listPosY[i];
double tmpX = totalX * pXi;
double tmpY = totalY * pYi;
double cXi_bar = cXi - tmpX;
double cYi_bar = cYi - tmpY;
double tmp1 = cXi_bar * cXi_bar;
double tmp2 = cYi_bar * cYi_bar;
double tmp3 = Math.Sqrt(tmpX * tmpY);
if (tmpX == 0)
{
tmpX = tmp3 = 1;
}
if (tmpY == 0)
{
tmpX = tmp3 = 1;
}
resultD2Star += cXi_bar * cYi_bar / tmp3;
tmpXD2Star += tmp1 / tmpX;
tmpYD2Star += tmp2 / tmpY;
}
//D2Star
tmpXD2Star = Math.Sqrt(tmpXD2Star);
tmpYD2Star = Math.Sqrt(tmpYD2Star);
resultD2Star = 0.5 * (1 - resultD2Star / (tmpXD2Star * tmpYD2Star));
SaveResult("D2Star_k" + k + "_M" + m, seqX, seqY, result, resultD2Star);
//result.AddToMatrix("D2Star_k" + k + "_M" + m, seqX.ID, seqY.ID, resultD2Star);
//result.AddToMatrix("D2Star_k" + k + "_M" + m, seqY.ID, seqX.ID, resultD2Star);
}
private void CalHao(SequenceData seqX, SequenceData seqY, Result result, int k, int m = 0)
{
if (k < 2)
{
return;
}
double resultHao = 0;
double tmpXY = 0;
double tmpX = 0;
double tmpY = 0;
double tmp1 = 0;
double tmp2 = 0;
double fXi = 0;
double fYi = 0;
List <int> listKtupleX = seqX.GetKtupleData(k);
List <double> listPosX = seqX.GetMarkovData(k, k - 2);
int totalX = seqX.GetTotal(k);
List <int> listKtupleY = seqY.GetKtupleData(k);
List <double> listPosY = seqY.GetMarkovData(k, k - 2);
int totalY = seqY.GetTotal(k);
for (int i = 0; i < listKtupleY.Count; i++)
{
fXi = listKtupleX[i] * 1.0 / totalX;
fYi = listKtupleY[i] * 1.0 / totalY;
if (listPosX[i] == 0)
{
tmp1 = -1;
}
else
{
tmp1 = (fXi / listPosX[i]) - 1;
}
if (listPosY[i] == 0)
{
tmp2 = -1;
}
else
{
tmp2 = (fYi / listPosY[i]) - 1;
}
tmpXY += tmp1 * tmp2;
tmpX += tmp1 * tmp1;
tmpY += tmp2 * tmp2;
}
tmpX = Math.Sqrt(tmpX);
tmpY = Math.Sqrt(tmpY);
resultHao = (1 - tmpXY / (tmpX * tmpY)) / 2;
SaveResult("Hao_k" + k, seqX, seqY, result, resultHao);
//result.AddToMatrix("Hao_k" + k, seqX.ID, seqY.ID, resultHao);
//result.AddToMatrix("Hao_k" + k, seqY.ID, seqX.ID, resultHao);
}
private void CalEu(SequenceData seqX, SequenceData seqY, Result result, int k, int m = 0)
{
//public
double fXi = 0;
double fYi = 0;
double cXi = 0;
double cYi = 0;
//Eu
double resultEu = 0;
double tmpEu = 0;
List <int> listKtupleX = seqX.GetKtupleData(k);
int totalX = seqX.GetTotal(k);
List <int> listKtupleY = seqY.GetKtupleData(k);
int totalY = seqY.GetTotal(k);
//Eu
for (int i = 0; i < listKtupleX.Count; i++)
{
//public
cXi = listKtupleX[i];
cYi = listKtupleY[i];
fXi = cXi / totalX;
fYi = cYi / totalY;
//Eu
tmpEu = (fXi - fYi) * (fXi - fYi);
resultEu += tmpEu;
}
//Eu
resultEu = Math.Sqrt(resultEu);
SaveResult("Eu_k" + k, seqX, seqY, result, resultEu);
//result.AddToMatrix("Eu_k" + k, seqX.ID, seqY.ID, resultEu);
//result.AddToMatrix("Eu_k" + k, seqY.ID, seqX.ID, resultEu);
}
private void CalMa(SequenceData seqX, SequenceData seqY, Result result, int k, int m = 0)
{
//public
double fXi = 0;
double fYi = 0;
double cXi = 0;
double cYi = 0;
//Ma
double tmpMa = 0;
double resultMa = 0;
List <int> listKtupleX = seqX.GetKtupleData(k);
int totalX = seqX.GetTotal(k);
List <int> listKtupleY = seqY.GetKtupleData(k);
int totalY = seqY.GetTotal(k);
//Ma
for (int i = 0; i < listKtupleX.Count; i++)
{
//public
cXi = listKtupleX[i];
cYi = listKtupleY[i];
fXi = cXi / totalX;
fYi = cYi / totalY;
//Ma
tmpMa = Math.Abs(fXi - fYi);
resultMa += tmpMa;
}
//Ma
SaveResult("Ma_k" + k, seqX, seqY, result, resultMa);
//result.AddToMatrix("Ma_k" + k, seqX.ID, seqY.ID, resultMa);
//result.AddToMatrix("Ma_k" + k, seqY.ID, seqX.ID, resultMa);
}
private void CalD2(SequenceData seqX, SequenceData seqY, Result result, int k, int m = 0)
{
//public
double cXi = 0;
double cYi = 0;
//D2
double resultD2 = 0;
double tmpXD2 = 0;
double tmpYD2 = 0;
double tmpD2 = 0;
List <int> listKtupleX = seqX.GetKtupleData(k);
List <int> listKtupleY = seqY.GetKtupleData(k);
for (int i = 0; i < listKtupleX.Count; i++)
{
//public
cXi = listKtupleX[i];
cYi = listKtupleY[i];
//D2
tmpD2 += cYi * cXi;
tmpXD2 += cXi * cXi;
tmpYD2 += cYi * cYi;
}
//D2
tmpXD2 = Math.Sqrt(tmpXD2);
tmpYD2 = Math.Sqrt(tmpYD2);
tmpD2 = tmpD2 / (tmpXD2 * tmpYD2);
resultD2 = 0.5 * (1 - tmpD2);
SaveResult("D2_k" + k, seqX, seqY, result, resultD2);
//result.AddToMatrix("D2_k" + k, seqX.ID, seqY.ID, resultD2);
//result.AddToMatrix("D2_k" + k, seqY.ID, seqX.ID, resultD2);
}
private void SaveResult(string key, SequenceData seqX, SequenceData seqY, Result result, double value)
{
result.Add(key, seqX.ID, seqY.ID, value);
}
private void CalEuMaChD2(SequenceData seqX, SequenceData seqY, Result result, int k, int m = 0)
{
//Eu
double resultEu = 0;
double tmpEu = 0;
//Ma
double tmpMa = 0;
double resultMa = 0;
//public
double fXi = 0;
double fYi = 0;
double cXi = 0;
double cYi = 0;
//Ch
double resultCh = 0;
//D2
double resultD2 = 0;
double tmpXD2 = 0;
double tmpYD2 = 0;
double tmpD2 = 0;
List <int> listKtupleX = seqX.GetKtupleData(k);
int totalX = seqX.GetTotal(k);
List <int> listKtupleY = seqY.GetKtupleData(k);
int totalY = seqY.GetTotal(k);
for (int i = 0; i < listKtupleX.Count; i++)
{
//public
cXi = listKtupleX[i];
cYi = listKtupleY[i];
fXi = cXi / totalX;
fYi = cYi / totalY;
//D2
tmpD2 += cYi * cXi;
tmpXD2 += cXi * cXi;
tmpYD2 += cYi * cYi;
//Eu
tmpEu = (fXi - fYi) * (fXi - fYi);
resultEu += tmpEu;
//Ma
tmpMa = Math.Abs(fXi - fYi);
resultMa += tmpMa;
//Ch
resultCh = tmpMa > resultCh ? tmpMa : resultCh;
}
//D2
tmpXD2 = Math.Sqrt(tmpXD2);
tmpYD2 = Math.Sqrt(tmpYD2);
tmpD2 = tmpD2 / (tmpXD2 * tmpYD2);
resultD2 = 0.5 * (1 - tmpD2);
//Eu
resultEu = Math.Sqrt(resultEu);
SaveResult("Eu_k" + k, seqX, seqY, result, resultEu);
SaveResult("Ch_k" + k, seqX, seqY, result, resultCh);
SaveResult("Ma_k" + k, seqX, seqY, result, resultMa);
SaveResult("D2_k" + k, seqX, seqY, result, resultD2);
//result.AddToMatrix("Eu_k" + k, seqX.ID, seqY.ID, resultEu);
//result.AddToMatrix("Ch_k" + k, seqX.ID, seqY.ID, resultCh);
//result.AddToMatrix("Ma_k" + k, seqX.ID, seqY.ID, resultMa);
//result.AddToMatrix("D2_k" + k, seqX.ID, seqY.ID, resultD2);
//result.AddToMatrix("Eu_k" + k, seqY.ID, seqX.ID, resultEu);
//result.AddToMatrix("Ch_k" + k, seqY.ID, seqX.ID, resultCh);
//result.AddToMatrix("Ma_k" + k, seqY.ID, seqX.ID, resultMa);
//result.AddToMatrix("D2_k" + k, seqY.ID, seqX.ID, resultD2);
}
