internal void ParseHeaderLines()
{
JsonTag = ParserUtilities.ParseTitle(_reader.ReadLine());
_tags = ParserUtilities.ParseTags(_reader.ReadLine(), "#geneSymbol", NumRequiredColumns, "second");
CheckTagsAndSetJsonKeys();
Categories = ParserUtilities.ParseCategories(_reader.ReadLine(), NumRequiredColumns, _numAnnotationColumns, _annotationValidators, "third");
Descriptions = ParserUtilities.ParseDescriptions(_reader.ReadLine(), NumRequiredColumns, _numAnnotationColumns, "forth");
ValueTypes = ParserUtilities.ParseTypes(_reader.ReadLine(), NumRequiredColumns, _numAnnotationColumns, "fifth");
}
internal void ParseHeaderLines()
{
string line;
while ((line = _reader.ReadLine()) != null)
{
if (line.StartsWith("#geneSymbol"))
{
break;
}
line = line.Trim();
(string key, string value) = line.OptimizedKeyValue();
switch (key)
{
case "#title":
JsonTag = value;
break;
case "#version":
Version = value;
break;
case "#description":
DataSourceDescription = value;
break;
default:
var e = new UserErrorException("Unexpected header tag observed");
e.Data[ExitCodeUtilities.Line] = line;
throw e;
}
}
_tags = ParserUtilities.ParseTags(line, "#geneSymbol", NumRequiredColumns);
CheckTagsAndSetJsonKeys();
Categories = ParserUtilities.ParseCategories(_reader.ReadLine(), NumRequiredColumns, _numAnnotationColumns, _annotationValidators);
Descriptions = ParserUtilities.ParseDescriptions(_reader.ReadLine(), NumRequiredColumns, _numAnnotationColumns);
ValueTypes = ParserUtilities.ParseTypes(_reader.ReadLine(), NumRequiredColumns, _numAnnotationColumns);
}
