protected void OnUpdateProductIon(UpdateMRMPairedProductIonEventArgs e)
{
if (ProductIonUpdate != null)
{
ProductIonUpdate(this, e);
}
}
private void DoUpdateFileModeProductIon()
{
var fileItem = GetFileModeItem();
fileItem.PairedPeptide.ProductIonPairs.ForEach(m => m.IsCurrent = m == fileItem.PairedProductIon);
UpdateMRMPairedProductIonEventArgs args = new UpdateMRMPairedProductIonEventArgs(fileItem.PairedProductIon, viewOption);
OnUpdateFileModeProductIon(args);
}
public void Update(object sender, UpdateMRMPairedProductIonEventArgs e)
{
var summary = e.Item;
if (summary == null)
{
throw new ArgumentNullException("UpdateMRMItemEventArgs.Item cannot be null");
}
panel.Tag = e.Item;
panel.ClearData();
try
{
if (summary.Heavy != null)
{
var pplRed = new PointPairList();
var noise = summary.DeductBaseLine ? summary.Light.Noise : 0.0;
for (int i = 0; i < summary.Light.Intensities.Count; i++)
{
if (summary.Light.Intensities[i].Enabled)
{
pplRed.Add(new PointPair(summary.Heavy.Intensities[i].Intensity - noise, summary.Light.Intensities[i].Intensity - noise, 0.0, i));
}
}
;
if (pplRed.Count > 0)
{
panel.AddPoints(pplRed, Color.Red);
PointPairList line = ZedGraphicExtension.GetRegressionLine(pplRed, summary.Ratio, summary.Distance);
panel.AddCurve(null, line, Color.Green, SymbolType.None);
panel.Title.Text = summary.GetFormula();
panel.Title.IsVisible = true;
}
else
{
panel.Title.IsVisible = false;
}
}
}
finally
{
ZedGraphicExtension.UpdateGraph(this.zgcGraph);
}
}
private SrmPairedProductIon DoUpdateProductIon()
{
var pep = GetPeptide();
if (pep == null)
{
return(null);
}
CurrencyManager cm = (CurrencyManager)this.BindingContext[pep.ProductIonPairs];
SrmPairedProductIon item = cm.Current as SrmPairedProductIon;
UpdateMRMPairedProductIonEventArgs args = new UpdateMRMPairedProductIonEventArgs(item, new SrmViewOption()
{
ViewGreenLine = true, ViewType = lastType
});
OnUpdateProductIon(args);
return(item);
}
public void Update(object sender, UpdateMRMPairedProductIonEventArgs e)
{
var summary = e.Item;
if (summary == null)
{
throw new ArgumentNullException("UpdateMRMPairedProductIonEventArgs.Item cannot be null");
}
MasterPane myMaster = zgcGraph.MasterPane;
myMaster.Border.IsVisible = false;
myMaster.PaneList.Clear();
try
{
myMaster.Margin.All = 10;
myMaster.InnerPaneGap = 10;
// Set the master pane title
myMaster.Title.Text = MyConvert.Format("{0:0.0000} - {1:0.0000}", summary.Light == null ? 0.0 : summary.Light.PrecursorMZ, summary.Heavy == null ? 0.0 : summary.Heavy.PrecursorMZ);
myMaster.Title.IsVisible = true;
myMaster.Legend.IsVisible = false;
myMaster.Add(new GraphPane());
myMaster.Add(new GraphPane());
new ZedGraphMRMProductIonScans(zgcGraph, myMaster.PaneList[0]).Update(null, e);
new ZedGraphMRMRegression(zgcGraph, myMaster.PaneList[1]).Update(null, e);
myMaster.SetLayout(g, PaneLayout.SingleRow);
zgcGraph.AxisChange();
}
finally
{
ZedGraphicExtension.UpdateGraph(this.zgcGraph);
}
}
public void Update(object sender, UpdateMRMPairedProductIonEventArgs e)
{
panel.ClearData();
var summary = e.Item;
if (summary == null)
{
return;
}
var option = e.ViewOption;
panel.Tag = summary;
panel.ClearData();
try
{
var enabledCount = summary.EnabledScanCount;
double maxLightIntensity, maxHeavyIntensity;
if (enabledCount == 0)
{
maxLightIntensity = summary.LightMaxIntensity;
maxHeavyIntensity = summary.HeavyMaxIntensity;
}
else
{
maxLightIntensity = summary.LightMaxEnabledIntensity;
maxHeavyIntensity = summary.HeavyMaxEnabledIntensity;
}
var maxIntensity = Math.Max(maxLightIntensity, maxHeavyIntensity);
if (summary.IsCurrent && option.ViewCurrentHighlight)
{
panel.Chart.Fill = new Fill(Color.Cornsilk);
}
else
{
panel.Chart.Fill = new Fill(Color.Transparent);
}
if (summary.Light != null && summary.Heavy != null && !option.ViewGreenLine)
{
AddAbsoluteCurve(summary.Light, "Light", Color.Blue, DashStyle.Solid);
AddAbsoluteCurve(summary.Heavy, "Heavy", Color.Red, DashStyle.Dot);
}
else
{
if (summary.Light != null)
{
AddAbsoluteCurve(summary.Light, "Light", Color.Blue, DashStyle.Solid);
}
if (summary.Heavy != null)
{
AddAbsoluteCurve(summary.Heavy, "Heavy", Color.Red, DashStyle.Solid);
}
if (option.ViewGreenLine)
{
if ((maxLightIntensity > maxHeavyIntensity) && (summary.Heavy != null))
{
AddAbsoluteCurve2(summary.Heavy, maxLightIntensity * 0.9 / maxHeavyIntensity, Color.Green);
}
else if (summary.Light != null)
{
AddAbsoluteCurve2(summary.Light, maxHeavyIntensity * 0.9 / maxLightIntensity, Color.Green);
}
}
}
var filename = string.IsNullOrEmpty(summary.FileName) ? "" : summary.FileName + "; ";
if (summary.IsPaired)
{
this.panel.Title.Text = filename + summary.GetFormula() + "\n" + summary.GetSignalToNoise();
}
else
{
this.panel.Title.Text = filename + summary.GetSignalToNoise();
}
this.panel.Title.IsVisible = true;
this.panel.YAxis.Scale.Min = 0;
if (option.ViewType == DisplayType.PerfectSize || option.ViewType == DisplayType.FullHeight)
{
var range = (from scan in summary.Light.Intensities
where scan.Enabled
orderby scan.RetentionTime
select scan.RetentionTime).ToList();
if (range.Count > 0)
{
var minRt = range.First() - 1;
var maxRt = range.Last() + 1;
panel.XAxis.Scale.Min = minRt;
panel.XAxis.Scale.Max = maxRt;
}
if (option.ViewType == DisplayType.PerfectSize)
{
panel.YAxis.Scale.Max = maxIntensity * 1.2;
}
}
}
finally
{
ZedGraphicExtension.UpdateGraph(this.zgcGraph);
}
}