public void CalculateLambda2CriterionIrregularGrids(List <Vector3d> pointsToRegistrate, Dictionary <string, List <float> > scalarValues, List <string> scalarNames, List <Vector4> tetraPoints)
{
List <float> scalarValuesX = new List <float>();
List <float> scalarValuesY = new List <float>();
List <float> scalarValuesZ = new List <float>();
//if (scalarNames.Count() <= 4)
//{
scalarValues.TryGetValue(scalarNames[0], out scalarValuesX);
scalarValues.TryGetValue(scalarNames[1], out scalarValuesY);
scalarValues.TryGetValue(scalarNames[2], out scalarValuesZ);
//}
//else
//{
// scalarValues.TryGetValue(scalarNames[1], out scalarValuesX);
// scalarValues.TryGetValue(scalarNames[2], out scalarValuesY);
// scalarValues.TryGetValue(scalarNames[3], out scalarValuesZ);
//}
vtkDoubleArray lambda2Values = new vtkDoubleArray();
List <double> lambda2ValuesList = new List <double>();
// create vectorfield
List <Vector3d> vectorField = new List <Vector3d>();
for (int i = 0; i < scalarValuesX.Count(); i++)
{
Vector3d vec = new Vector3d(scalarValuesX[i], scalarValuesY[i], scalarValuesZ[i]);
vectorField.Add(vec);
}
int count = 0;
double[,] lambda2ValuesArray = new double[pointsToRegistrate.Count(), 2];
for (int k = 0; k < tetraPoints.Count(); k++)
{
// first rows and than columns
double[,] A = new double[12, 12];
double[,] rightSide = new double[12, 1];
int i = 0, j = 0;
int s = 0;
if (k == 779834)
{
Console.WriteLine("Test");
}
for (int g = 0; g < 12; g += 3, i++, s++)
{
//1-3 columns of 4x3 Matrix
for (int l = 0; l < 3; l++)
{
for (int m = 0; m < 3; m++)
{
if (l == m)
{
// Warum tetraPoints[k]
A[g + l, m] = pointsToRegistrate[(int)tetraPoints[k][i]].X;
}
else
{
A[g + l, m] = 0;
}
}
}
for (int l = 0; l < 3; l++)
{
for (int m = 3; m < 6; m++)
{
if (l == (m - 3))
{
A[g + l, m] = pointsToRegistrate[(int)tetraPoints[k][i]].Y;
}
else
{
A[g + l, m] = 0;
}
}
}
for (int l = 0; l < 3; l++)
{
for (int m = 6; m < 9; m++)
{
if (l == (m - 6))
{
A[g + l, m] = pointsToRegistrate[(int)tetraPoints[k][i]].Z;
}
else
{
A[g + l, m] = 0;
}
}
}
for (int l = 0; l < 3; l++)
{
for (int m = 9; m < 12; m++)
{
if (l == (m - 9))
{
A[g + l, m] = 1;
}
else
{
A[g + l, m] = 0;
}
}
}
rightSide[g, 0] = vectorField[(int)tetraPoints[k][s]].X;
rightSide[g + 1, 0] = vectorField[(int)tetraPoints[k][s]].Y;
rightSide[g + 2, 0] = vectorField[(int)tetraPoints[k][s]].Z;
}
//for (int l = 0; l < 12; l++)
//{
// for (int m = 0; m < 12; m++)
// {
// Console.Write(A[l, m] + " ");
// }
// Console.WriteLine("");
//}
double[,] Vold = Accord.Math.Matrix.Solve(A, rightSide, leastSquares: true);
// Solve matrix with matlab
//LGS lgsObj = new LGS();
//MWNumericArray mwV = (MWNumericArray)lgsObj.solveLGS((MWNumericArray)A, (MWNumericArray)rightSide);
//double[,] V = new double[mwV.Dimensions[0], 1];
//for (i = 1; i <= mwV.Dimensions[1]; i++)
//{
// V[i, 0] = (double)mwV[1, i];
//}
double[,] jacobiMat = new double[3, 3];
int n = 0;
for (i = 0; i < 3; i++)
{
for (j = 0; j < 3; j++)
{
// first increas rows and than columns
jacobiMat[j, i] = Vold[n, 0];
//jacobiMat[i, j] = Vold[n, 0];
n++;
}
}
if (jacobiMat[1, 1] == 0 && jacobiMat[0, 0] == 0 && jacobiMat[2, 2] == 0)
{
//lambda2Values.InsertNextValue(0);
//lambda2ValuesList.Add(0);
count++;
}
//only if diagonal elements are not equal zero
else
{
MatrixOperations classObj = new MatrixOperations();
double[,] transposedJacobiMat = classObj.TransposeRowsAndColumns(jacobiMat);
// calculation of S und Omega
double[,] S = classObj.DivideArrayByValue(classObj.AddArrays(jacobiMat, transposedJacobiMat), 2);
double[,] squaredS = classObj.MultiplyArrays(S, S);
double[,] Omega = classObj.DivideArrayByValue(classObj.SubtractArrays(jacobiMat, transposedJacobiMat), 2);
double[,] squaredOmega = classObj.MultiplyArrays(Omega, Omega);
double[,] summation = classObj.AddArrays(squaredS, squaredOmega);
var eigenvalueDecomposition = new Accord.Math.Decompositions.EigenvalueDecomposition(summation, false, true, true);
var eigenVec = eigenvalueDecomposition.Eigenvectors;
var eigenValue = eigenvalueDecomposition.RealEigenvalues;
double lambda2 = eigenValue[1];
//int t = (int)lambda2Values.InsertNextValue(lambda2);
//lambda2ValuesList.Add(lambda2);
lambda2ValuesArray[(int)tetraPoints[k][0], 0] += lambda2;
lambda2ValuesArray[(int)tetraPoints[k][0], 1] += 1;
lambda2ValuesArray[(int)tetraPoints[k][1], 0] += lambda2;
lambda2ValuesArray[(int)tetraPoints[k][1], 1] += 1;
lambda2ValuesArray[(int)tetraPoints[k][2], 0] += lambda2;
lambda2ValuesArray[(int)tetraPoints[k][2], 1] += 1;
lambda2ValuesArray[(int)tetraPoints[k][3], 0] += lambda2;
lambda2ValuesArray[(int)tetraPoints[k][3], 1] += 1;
//if (k == 779834)
// Console.WriteLine("Test");
//if (lambda2 < 0)
//{
// lambda2ValuesArray[(int)tetraPoints[k][0], 0] = lambda2;
// lambda2ValuesArray[(int)tetraPoints[k][0], 1] += 1;
//}
////else
////{
//// lambda2ValuesArray[(int)tetraPoints[k][0], 0] += lambda2;
//// lambda2ValuesArray[(int)tetraPoints[k][0], 1] += 1;
////}
//if (lambda2 < 0)
//{
// lambda2ValuesArray[(int)tetraPoints[k][1], 0] = lambda2;
// lambda2ValuesArray[(int)tetraPoints[k][1], 1] += 1;
//}
////else
////{
//// lambda2ValuesArray[(int)tetraPoints[k][1], 0] += lambda2;
//// lambda2ValuesArray[(int)tetraPoints[k][1], 1] += 1;
////}
//if (lambda2 < 0)
//{
// lambda2ValuesArray[(int)tetraPoints[k][2], 0] = lambda2;
// lambda2ValuesArray[(int)tetraPoints[k][2], 1] += 1;
//}
////else
////{
//// lambda2ValuesArray[(int)tetraPoints[k][2], 0] += lambda2;
//// lambda2ValuesArray[(int)tetraPoints[k][2], 1] += 1;
////}
//if (lambda2 < 0)
//{
// lambda2ValuesArray[(int)tetraPoints[k][3], 0] = lambda2;
// lambda2ValuesArray[(int)tetraPoints[k][3], 1] += 1;
//}
// if (lambda2ValuesArray[(int)tetraPoints[k][0], 1] == 0)
//{
// lambda2ValuesArray[(int)tetraPoints[k][0], 0] = lambda2;
//}
// if (lambda2ValuesArray[(int)tetraPoints[k][1], 1] == 0)
//{
// lambda2ValuesArray[(int)tetraPoints[k][1], 0] = lambda2;
//}
// if (lambda2ValuesArray[(int)tetraPoints[k][2], 1] == 0)
//{
// lambda2ValuesArray[(int)tetraPoints[k][2], 0] = lambda2;
//}
// if (lambda2ValuesArray[(int)tetraPoints[k][3], 1] == 0)
//{
// lambda2ValuesArray[(int)tetraPoints[k][3], 0] = lambda2;
//}
}
}
for (int i = 0; i < pointsToRegistrate.Count(); i++)
{
if (lambda2ValuesArray[i, 1] > 1)
{
double lambda2 = lambda2ValuesArray[i, 0] / lambda2ValuesArray[i, 1];
//if (lambda2 < 0)
// Console.WriteLine("lambda2 ist " + lambda2);
lambda2ValuesList.Add(lambda2);
lambda2Values.InsertNextValue(lambda2);
count++;
}
else
{
count++;
lambda2Values.InsertNextValue(lambda2ValuesArray[i, 0]);
}
}
//WriteScalarDifferences(lambda2ValuesList, "..\\..\\..\\..\\..\\03Daten\\lambda2\\Tomo_lambda2regularGridsOwnEigen.txt");
vtkDataArray dataArray;
dataArray = lambda2Values;
dataArray.SetName("lambda2");
if (this.scalar_dataArray.ContainsKey("lambda2"))
{
this.scalar_dataArray["lambda2"] = lambda2Values;
}
else
{
this.scalar_dataArray.Add("lambda2", dataArray);
this.arrayNames.Add("lambda2");
}
}
public void CalculateLambdaCriterionRegularGrids(List <Vector3d> pointsToRegistrate, Dictionary <string, List <float> > scalarValues, List <string> scalarNames, int[] dimensions)
{
List <float> scalarValuesX = new List <float>();
scalarValues.TryGetValue(scalarNames[0], out scalarValuesX);
List <float> scalarValuesY = new List <float>();
scalarValues.TryGetValue(scalarNames[1], out scalarValuesY);
List <float> scalarValuesZ = new List <float>();
scalarValues.TryGetValue(scalarNames[2], out scalarValuesZ);
// create vectorfield
List <Vector3d> vectorField = new List <Vector3d>();
for (int i = 0; i < scalarValuesX.Count(); i++)
{
Vector3d vec = new Vector3d(scalarValuesX[i], scalarValuesY[i], scalarValuesZ[i]);
vectorField.Add(vec);
}
vtkDoubleArray lambda2Values = new vtkDoubleArray();
// lambda2Values.SetNumberOfValues(vectorField.Count());
int sizeJacobimat = 3;
// iterating over all points
for (int k = 0; k < vectorField.Count(); k++)
{
if (k == 356003)
{
Console.WriteLine("ID");
}
double[,] jacobiMat = new double[sizeJacobimat, sizeJacobimat];
for (int j = 0, i = 0; j < sizeJacobimat; j++, i++)
{
Vector3d vec = vectorField[k];
Vector3d gradVec = new Vector3d();
// first column of jacobi matrix
if (i == 0)
{
// forward difference
if (k == 0)
{
double hx = Math.Abs(pointsToRegistrate[k + 1].X - pointsToRegistrate[k].X);
gradVec = (vectorField[k + 1] - vec) / hx;
}
// backward difference
else if (k == vectorField.Count() - 1)
{
double hx = Math.Abs(pointsToRegistrate[k - 1].X - pointsToRegistrate[k].X);
gradVec = (vec - vectorField[k - 1]) / hx;
}
// central difference
else
{
double hx = Math.Abs(pointsToRegistrate[k + 1].X - pointsToRegistrate[k].X);
Vector3d f = vectorField[k + 1];
Vector3d b = vectorField[k - 1];
gradVec = (f - b) / (2 * hx);
}
}
// second column of jacobi matrix
else if (i == 1)
{
// forward difference
if (k - dimensions[0] < 0)
{
double hy = Math.Abs(pointsToRegistrate[k + dimensions[0]].Y - pointsToRegistrate[k].Y);
gradVec = (vectorField[k + dimensions[0]] - vec) / hy;
}
// backward difference
else if (k + dimensions[0] > vectorField.Count() - 1)
{
double hy = Math.Abs(pointsToRegistrate[k - dimensions[0]].Y - pointsToRegistrate[k].Y);
gradVec = (vec - vectorField[k - dimensions[0]]) / hy;
}
// central difference
else
{
double hy = Math.Abs(pointsToRegistrate[k + dimensions[0]].Y - pointsToRegistrate[k].Y);
Vector3d f = vectorField[k + dimensions[0]];
Vector3d b = vectorField[k - dimensions[0]];
gradVec = (f - b) / (2 * hy);
}
}
// third column of jacobi matrix
else if (i == 2)
{
// forward difference
if (k - (dimensions[0] * dimensions[1]) < 0)
{
double hz = Math.Abs(pointsToRegistrate[k + (dimensions[0] * dimensions[1])].Z - pointsToRegistrate[k].Z);
gradVec = (vectorField[k + (dimensions[0] * dimensions[1])] - vec) / hz;
}
// backward difference
else if (k + (dimensions[0] * dimensions[1]) > vectorField.Count() - 1)
{
double hz = Math.Abs(pointsToRegistrate[k - (dimensions[0] * dimensions[1])].Z - pointsToRegistrate[k].Z);
gradVec = (vec - vectorField[k - (dimensions[0] * dimensions[1])]) / hz;
}
// central difference
else
{
double hz = Math.Abs(pointsToRegistrate[k + (dimensions[0] * dimensions[1])].Z - pointsToRegistrate[k].Z);
Vector3d f = vectorField[k + (dimensions[0] * dimensions[1])];
Vector3d b = vectorField[k - (dimensions[0] * dimensions[1])];
gradVec = (f - b) / (2 * hz);
}
}
// fill jacobi matrix
jacobiMat[0, j] = gradVec[0];
jacobiMat[1, j] = gradVec[1];
if (sizeJacobimat == 3)
{
jacobiMat[2, j] = gradVec[2];
}
}
// only if diagonal elements are not equal zero
if (jacobiMat[1, 1] == 0 && jacobiMat[0, 0] == 0 && jacobiMat[2, 2] == 0)
{
lambda2Values.InsertNextValue(0);
}
else
{
MatrixOperations classObj = new MatrixOperations();
double[,] transposedJacobiMat = classObj.TransposeRowsAndColumns(jacobiMat);
// calculation of S und Omega
double[,] S = classObj.DivideArrayByValue(classObj.AddArrays(jacobiMat, transposedJacobiMat), 2);
double[,] squaredS = classObj.MultiplyArrays(S, S);
double[,] Omega = classObj.DivideArrayByValue(classObj.SubtractArrays(jacobiMat, transposedJacobiMat), 2);
double[,] squaredOmega = classObj.MultiplyArrays(Omega, Omega);
double[,] summation = classObj.AddArrays(squaredS, squaredOmega);
var eigenvalueDecomposition = new Accord.Math.Decompositions.EigenvalueDecomposition(summation, false, false, true);
var eigenVec = eigenvalueDecomposition.Eigenvectors;
var eigenValue = eigenvalueDecomposition.RealEigenvalues;
double lambda2 = eigenValue[1];
lambda2Values.InsertNextValue(lambda2);
}
}
vtkDataArray dataArray;
dataArray = lambda2Values;
dataArray.SetName("lambda2");
Console.WriteLine("All lambda2 were calculated!");
if (this.scalar_dataArray.ContainsKey("lambda2"))
{
this.scalar_dataArray["lambda2"] = lambda2Values;
}
else
{
this.scalar_dataArray.Add("lambda2", dataArray);
this.arrayNames.Add("lambda2");
}
}
