/// <summary>
/// 公有构造函数
/// </summary>
/// <param name="type">氨基酸类型</param>
/// <param name="isStandard">是否是标准残基</param>
/// <param name="atoms">构成氨基酸得原子</param>
/// <param name="connection">原子间的连接关系</param>
internal Aminoacid(AminoacidType type, string chinese, bool isStandard, IList <string> atomNames, IDictionary <KeyValuePair <string, string>, BondType> connection)
{
this.Type = type;
this.Chinese = chinese;
List <AtomInAminoacid> atoms = new List <AtomInAminoacid>();
foreach (string name in atomNames)
{
AtomInAminoacid atomInAminoacid = new AtomInAminoacid(name)
{
Aminoacid = this,
};
atoms.Add(atomInAminoacid);
}
//Atoms = new ReadOnlyCollection<AtomInAminoacid>(atoms);
atomDic = new Dictionary <string, AtomInAminoacid>();
foreach (var child in atoms)
{
atomDic.Add(child.Name, child);
}
Dictionary <KeyValuePair <AtomInAminoacid, AtomInAminoacid>, BondType> connectDic = new Dictionary <KeyValuePair <AtomInAminoacid, AtomInAminoacid>, BondType>();
foreach (var child in connection)
{
// this是38行的索引器的调用，即输入原子名字string(含后缀的)，返回对应的原子实例
connectDic.Add(new KeyValuePair <AtomInAminoacid, AtomInAminoacid>(this[child.Key.Key], this[child.Key.Value]), child.Value);
}
Connections = new ReadOnlyDictionary <KeyValuePair <AtomInAminoacid, AtomInAminoacid>, BondType>(connectDic);
}
public override bool Equals(object obj)
{
AtomInAminoacid atom = obj as AtomInAminoacid;
if (atom == null)
{
return(false);
}
else
{
return(this.Aminoacid == atom.Aminoacid && this.Name == atom.Name);
}
}
