public void AddNeuron()
{
if (!AllSynapses.Any())
{
AddSynapse();
return;
}
//Debug.Log("Poczatek add neuron");
int tmp = RandomGenerator.Next(AllSynapses.Count);
Synapse oldSyn = AllSynapses.ToList()[tmp].Value;
AllSynapses.Remove(oldSyn.InnovationNo);
oldSyn.InputNeuron.OutputSynapses.Remove(oldSyn);
oldSyn.OutputNeuron.InputSynapses.Remove(oldSyn);
Neuron neuron = new Neuron(NeuronInnovationNo);
Synapse newSyn1 = new Synapse(oldSyn.InputNeuron, neuron, SynapseInnovationNo);
newSyn1.Weight = 1;
Synapse newSyn2 = new Synapse(neuron, oldSyn.OutputNeuron, SynapseInnovationNo);
newSyn2.Weight = oldSyn.Weight;
HiddenLayers.Add(neuron.InnovationNo, neuron);
AllSynapses.Add(newSyn1.InnovationNo, newSyn1);
AllSynapses.Add(newSyn2.InnovationNo, newSyn2);
}
public void ConnectAxon(INeuron input, INeuron output, int neuronsCount)
{
var axon = new Synapse(input, output, XavierWeight(neuronsCount));
(output.Inputs as SynapseCollection <ISynapse>).Add(axon);
(input.Outputs as SynapseCollection <ISynapse>).Add(axon);
}
public void AddInputNeuron(INeuron inputNeuron)
{
var synapse = new Synapse(inputNeuron, this);
Inputs.Add(synapse);
inputNeuron.Outputs.Add(synapse);
}
public void AddOutputNeuron(INeuron outputNeuron)
{
var synapse = new Synapse(this, outputNeuron);
Outputs.Add(synapse);
outputNeuron.Inputs.Add(synapse);
}
public void AddOutputNeuron(Neuron neuron)
{
Synapse synapse = new Synapse(this, neuron);
Outputs.Add(synapse);
neuron.Inputs.Add(synapse);
}
public Neuron(IEnumerable <Neuron> inputNeurons) : this()
{
foreach (var inputNeuron in inputNeurons)
{
var synapse = new Synapse(inputNeuron, this);
inputNeuron.OutputSynapses.Add(synapse);
InputSynapses.Add(synapse);
}
}
public void RenderSynapses(Vector3 startPos, Vector3 endPos, float neuronDist, float width)
{
for (int i = 0; i < OutputSynapses.Count; i++)
{
Synapse synapse = OutputSynapses[i];
float unitWeight = synapse.Weight / 10f;
Color neuronCol = GLHelper.ColorFromUnitFloat(unitWeight);
GLHelper.DrawLine(startPos, endPos, neuronCol, width);
endPos.y -= neuronDist;
}
}
private void DelSynapse()
{
if (!AllSynapses.Any())
{
return;
}
int tmp = RandomGenerator.Next(AllSynapses.Count);
Synapse oldSyn = AllSynapses.Values.ToList()[tmp];
oldSyn.InputNeuron.OutputSynapses.Remove(oldSyn);
oldSyn.OutputNeuron.InputSynapses.Remove(oldSyn);
AllSynapses.Remove(oldSyn.InnovationNo);
}
public void AddSynapse()
{
//Debug.Log("Poczatek add synapse");
//get 2 random neurons and connect them
int ineur1 = RandomGenerator.Next(InputLayer.Count + HiddenLayers.Count);
Neuron neuron1;
if (ineur1 < InputLayer.Count)
{
neuron1 = InputLayer[ineur1];
}
else
{
neuron1 = HiddenLayers.Values.ToArray()[ineur1 - InputLayer.Count];
}
int ineur2 = RandomGenerator.Next(OutputLayer.Count + HiddenLayers.Count);
Neuron neuron2;
if (ineur2 < OutputLayer.Count)
{
neuron2 = OutputLayer[ineur2];
}
else
{
neuron2 = HiddenLayers.Values.ToArray()[ineur2 - OutputLayer.Count];
if (!recurrent && neuron1.ConnectionWouldMakeCycle(neuron2)) //lets not make cycles
{
Neuron tmp = neuron1;
neuron1 = neuron2;
neuron2 = tmp;
}
}
//check if it already exist
if (neuron1 == neuron2)
{
return;
}
foreach (var synapse in AllSynapses)
{
if (synapse.Value.InputNeuron == neuron1 && synapse.Value.OutputNeuron == neuron2)
{
return;
}
}
Synapse syn = new Synapse(neuron1, neuron2, SynapseInnovationNo);
AllSynapses.Add(syn.InnovationNo, syn);
}
public void MutateAddSynapse()
{
Neuron source = GetRandomNeuron(iNodes);
Neuron dest = source;
while (dest.Equals(source))
{
dest = GetRandomNeuron(oNodes);
}
Synapse syn = new Synapse(source, dest, randomGen.NextDouble());
source.AddOutput(syn);
dest.AddInput(syn);
}
void AddSynapse(Synapse template)
{
if (AllSynapses.ContainsKey(template.InnovationNo))
{
Debug.Log("wtf??");
Debug.Break();
}
Neuron neuron1 = null, neuron2 = null;
if (template.InputNeuron.InnovationNo <= InputLayer.Count)
{
neuron1 = InputLayer[template.InputNeuron.InnovationNo - 1];
}
else
{
if (HiddenLayers.ContainsKey(template.InputNeuron.InnovationNo))
{
neuron1 = HiddenLayers[template.InputNeuron.InnovationNo];
}
else
{
neuron1 = new Neuron(template.InputNeuron);
HiddenLayers.Add(neuron1.InnovationNo, neuron1);
}
}
if (template.OutputNeuron.InnovationNo <= InputLayer.Count + OutputLayer.Count)
{
neuron2 = OutputLayer[template.OutputNeuron.InnovationNo - InputLayer.Count - 1];
}
else
{
if (HiddenLayers.ContainsKey(template.OutputNeuron.InnovationNo))
{
neuron2 = HiddenLayers[template.OutputNeuron.InnovationNo];
}
else
{
neuron2 = new Neuron(template.OutputNeuron);
HiddenLayers.Add(neuron2.InnovationNo, neuron2);
}
}
Synapse newSyn = new Synapse(neuron1, neuron2, template.InnovationNo);
newSyn.Weight = template.Weight;
AllSynapses.Add(newSyn.InnovationNo, newSyn);
//Debug.Log("Koniec add synapse template");
}
public void Init(Layer prev)
{
//No input synapses
if (prev == null)
{
return;
}
foreach (var pn in prev.Neurons)
{
//int inputIndex = 1;
foreach (var n in Neurons)
{
var synapse = new Synapse(pn, n, n.InputSynapses.Count + 1, Util.r.NextDouble());
pn.OutputSynapses.Add(synapse);
n.InputSynapses.Add(synapse);
}
}
}
public void MutateAddNeuron()
{
Neuron temp = new Neuron();
Neuron source = GetRandomNeuron(iNodes);
Synapse synIn = new Synapse(source, temp, randomGen.NextDouble());
source.AddOutput(synIn);
temp.AddInput(synIn);
Neuron destination = GetRandomNeuron(oNodes);
Synapse synOut = new Synapse(temp, destination, randomGen.NextDouble());
destination.AddInput(synOut);
temp.AddOutput(synOut);
iNodes.Add(temp);
oNodes.Add(temp);
ioNodes.Add(temp);
}
public void MutateSplice()
{
Neuron source = GetRandomNeuron(iNodes);
Synapse sourceSynapse = GetRandomSynapse(source.GetOutputs());
Neuron destination = sourceSynapse.GetDestination();
Neuron temp = new Neuron();
sourceSynapse.SetDestinationNeuron(temp);
destination.GetInputs().Remove(sourceSynapse);
Synapse tempSynapse = new Synapse(temp, destination, randomGen.NextDouble());
temp.GetOutputs().Add(tempSynapse);
destination.GetInputs().Add(tempSynapse);
iNodes.Add(temp);
oNodes.Add(temp);
ioNodes.Add(temp);
}
public void AddInputSynapse(double input)
{
Synapse synapse = new Synapse(this, input);
Inputs.Add(synapse);
}
public Network Copy()
{
/* Needed for breadth first graph traversal */
Queue <Neuron> queue = new Queue <Neuron>();
Dictionary <Neuron, Neuron> map = new Dictionary <Neuron, Neuron> ();
/* Cloned network */
Network copyNetwork = new Network();
/* We will start traversal from the actuator */
Neuron originalActuator = this.actuator;
Neuron copyActuator = new Neuron();
copyNetwork.SetActuator(copyActuator);
/* Add the first in line for processing, the original actuator */
queue.Enqueue(originalActuator);
map.Add(originalActuator, copyActuator);
List <Neuron> copyioNodes = new List <Neuron>();
List <Neuron> copyiNodes = new List <Neuron>();
List <Neuron> copyoNodes = new List <Neuron>();
List <Neuron> copySensors = new List <Neuron>();
foreach (Neuron s in sensors)
{
Neuron temp = new Neuron();
map.Add(s, temp);
queue.Enqueue(s);
copySensors.Add(temp);
copyiNodes.Add(temp);
}
while (queue.Count > 0)
{
/* Node we are currently processing */
Neuron originalNode = queue.Dequeue();
List <Synapse> inputSynapses = originalNode.GetInputs();
List <Synapse> outputSynapses = originalNode.GetOutputs();
/* Clone of the original node that is being processed */
Neuron copyNode = map[originalNode];
foreach (Synapse inputSynapse in inputSynapses)
{
/* Get the real input node */
Neuron inputOriginal = inputSynapse.GetSource();
/* If the copy of the inputOriginal doesn't exist, create it. Otherwise just connect */
if (!map.ContainsKey(inputOriginal))
{
Neuron inputCopy = new Neuron();
copyioNodes.Add(inputCopy);
Synapse synapseCopy = new Synapse(inputCopy, copyNode, inputSynapse.getWeight());
inputCopy.AddOutput(synapseCopy);
copyNode.AddInput(synapseCopy);
map.Add(inputOriginal, inputCopy);
queue.Enqueue(inputOriginal);
}
else
{
/* Get the copy of the real node since it exists */
Neuron inputCopy = map[inputOriginal];
bool alreadyExists = false;
foreach (Synapse n in inputCopy.GetOutputs())
{
if (n.GetSource().Equals(inputCopy) && n.GetDestination().Equals(copyNode))
{
alreadyExists = true;
break;
}
}
if (!alreadyExists)
{
/* Create input synapse between cloned nodes */
Synapse copySynapse = new Synapse(inputCopy, copyNode, inputSynapse.getWeight());
copyNode.AddInput(copySynapse);
inputCopy.AddOutput(copySynapse);
}
}
}
foreach (Synapse outputSynapse in outputSynapses)
{
/* Get the real output node */
Neuron outputOriginal = outputSynapse.GetDestination();
/* If the copy of the outputOriginal doesn't exist, create it. Otherwise just connect */
if (!map.ContainsKey(outputOriginal))
{
Neuron outputCopy = new Neuron();
copyioNodes.Add(outputCopy);
Synapse syn = new Synapse(copyNode, outputCopy, outputSynapse.getWeight());
copyNode.AddOutput(syn);
outputCopy.AddInput(syn);
map.Add(outputOriginal, outputCopy);
queue.Enqueue(outputOriginal);
}
else
{
/* Get the copy of the real node since it exists */
Neuron outputCopy = map[outputOriginal];
bool alreadyExists = false;
foreach (Synapse n in outputCopy.GetInputs())
{
if (n.GetSource().Equals(copyNode) && n.GetDestination().Equals(outputCopy))
{
alreadyExists = true;
break;
}
}
if (!alreadyExists)
{
/* Create output synapse between cloned nodes */
Synapse copySynapse = new Synapse(copyNode, outputCopy, outputSynapse.getWeight());
copyNode.AddOutput(copySynapse);
outputCopy.AddInput(copySynapse);
}
}
}
}
/* Set newly created sensors */
copyNetwork.SetSensors(copySensors);
/* Within cloned network, remove sensors from ioNodes, add to iNodes*/
//for (Neuron copySensor : copySensors) {
// copyioNodes.remove(copySensor);
// copyiNodes.add(copySensor);
// }
/* Add all nodes (except sensors, and actuator) to iNodes and oNodes */
foreach (Neuron ioNode in copyioNodes)
{
copyiNodes.Add(ioNode);
copyoNodes.Add(ioNode);
}
/* Add actuator to oNodes */
copyoNodes.Add(copyActuator);
copyNetwork.SetInputNodes(copyiNodes);
copyNetwork.SetOutputNodes(copyoNodes);
copyNetwork.SetInputOutputNodes(copyioNodes);
// Crap code ahead ================================ WOO HOO WATCH ME ==========================================
// TODO: Erase this souts once we create a few working networks
// System.out.println("Length of ioNodes " + copyioNodes.size());
// System.out.println("Length of iNodes " + copyiNodes.size() + " it should be ioNodes + 3");
// System.out.println("Length of oNodes " + copyoNodes.size() + " it should be ioNodes + 1");
// System.out.println(copyNetwork.actuator);
// System.out.println(copyActuator);
// System.out.println(copyActuator.weightedSum);
// for (Neuron n : copyNetwork.iNodes)
// {
// System.out.println(n.weightedSum);
// System.out.println(n.getOutputs());
// System.out.println(n.getInputs());
// }
// Crap code finished ============================= WOO HOO WATCH ME ==========================================
return(copyNetwork);
}
public void AddInput(Synapse input)
{
InputSynapses.Add(input);
}
public void AddInput(Synapse input)
{
inputs.Add(input);
}
public void AddOutput(Synapse output)
{
outputs.Add(output);
}
