public void Cardinality(string casesFilesDir, int maxNumOfDiag)
{
CSVExport myExport = new CSVExport();
List <PhysioCaseInstance> physioCases = new List <PhysioCaseInstance>();
List <string> files = Directory.GetFiles(casesFilesDir).ToList();
foreach (string file in files)
{
PhysioCaseInstance physioCase = caseParser.ParseCase(file);
if (physioCase != null)
{
physioCases.Add(physioCase);
}
}
foreach (PhysioCaseInstance physioCase in physioCases)
{
if (physioCase.Diagnoses.Count < 2 || (maxNumOfDiag > 0 && physioCase.Diagnoses.Count > maxNumOfDiag))
{
continue;
}
myExport.AddRow();
myExport["Observation"] = physioCase.Id;
myExport["RealDiagCard"] = physioCase.RealDiagCardinality;
myExport["MaxCard"] = physioCase.MaxCardinality;
myExport["MinCard"] = physioCase.MinCardinality;
}
myExport.ExportToFile("Physiotherapy_Cardinality.csv");
}
public void RealWC(string casesFilesDir, int maxNumOfDiag, BatchCostEstimator bce)
{
CSVExport myExport = new CSVExport();
List <PhysioCaseInstance> physioCases = new List <PhysioCaseInstance>();
string bceType = bce.Type();
string overhead = bce.Overhead + "";
List <string> files = Directory.GetFiles(casesFilesDir).ToList();
foreach (string file in files)
{
PhysioCaseInstance physioCase = caseParser.ParseCase(file);
if (physioCase != null)
{
physioCases.Add(physioCase);
}
}
foreach (PhysioCaseInstance physioCase in physioCases)
{
if (physioCase.Diagnoses.Count < 2 || (maxNumOfDiag > 0 && physioCase.Diagnoses.Count > maxNumOfDiag))
{
continue;
}
SystemState currSystemState = new SystemState(physioCase.Diagnoses.Components);
currSystemState.Diagnoses = physioCase.Diagnoses; //!! check for bug
double wc = bce.WastedCostUtility(new RepairAction(physioCase.RealDiagnosis.Diag), currSystemState);
myExport.AddRow();
myExport["Objective Function"] = bceType;
myExport["Overhead"] = overhead;
myExport["Observation"] = physioCase.Id;
myExport["RealDiag"] = physioCase.RealDiagnosis;
myExport["RealWC"] = wc;
}
string fileName = "Physiotherapy_RealWC";
if (maxNumOfDiag > 0)
{
fileName += "_maxDiag=" + maxNumOfDiag;
}
fileName += "_" + bceType + "_o=" + overhead;
myExport.ExportToFile(fileName + ".csv");
}
public void BatchRepair(string casesFilesDir, BatchPlanner planner, double overhead, int maxNumOfDiag)
{
Console.WriteLine(planner.Type() + " o=" + overhead);
Stopwatch stopwatch = new Stopwatch();
CSVExport myExport = new CSVExport();
List <PhysioCaseInstance> physioCases = new List <PhysioCaseInstance>();
List <string> files = Directory.GetFiles(casesFilesDir).ToList();
foreach (string file in files)
{
PhysioCaseInstance physioCase = caseParser.ParseCase(file);
if (physioCase != null)
{
physioCases.Add(physioCase);
}
}
foreach (PhysioCaseInstance physioCase in physioCases)
{
if (physioCase.Diagnoses.Count < 2 || (physioCase.Diagnoses.Count > maxNumOfDiag && maxNumOfDiag > 0))//!!
{
continue;
}
// Console.WriteLine(physioCase.Id); //!!
int iterationCounter = 0;
double totalCost = 0;
int numberOfFixed = 0;
int expanded = 0;
bool foundOpt = true;
bool finished = false;
List <Comp> toRepair = new List <Comp>(physioCase.RealDiagnosis.Diag);
SystemState currSystemState = new SystemState(physioCase.Diagnoses.Components);
currSystemState.Diagnoses = physioCase.Diagnoses; //!! check for bug
stopwatch.Start();
while (!finished)
{
RepairAction action = planner.Plan(currSystemState);
if (action == null)
{
break; //!!
}
iterationCounter++;
totalCost += overhead;
numberOfFixed += action.Count;
foreach (Comp comp in action.R)
{
totalCost += comp.Cost;
if (toRepair.Contains(comp))
{
toRepair.Remove(comp);
}
}
if (toRepair.Count > 0)
{
currSystemState.SetNextState(action);
}
else
{
finished = true;
}
if (iterationCounter == 1)
{
expanded = planner.IterationDetails.NumOfExpanded;
foundOpt = planner.IterationDetails.FoundOpt;
}
planner.ExportIterationDetails("1", physioCase.Id, iterationCounter, finished);
}
if (!finished)//!!
{
continue;
}
stopwatch.Stop();
int time = stopwatch.Elapsed.Milliseconds;
stopwatch.Reset();
myExport.AddRow();
//myExport["System"] = model.Id;
myExport["Algorithm"] = planner.Algorithm();
if (planner.Bounded)
{
myExport["Bound"] = planner.Bound;
}
else
{
myExport["Bound"] = "No Bound";
}
myExport["Objective Function"] = planner.ObjectiveFunction();
myExport["Overhead"] = overhead;
myExport["Observation"] = physioCase.Id;
myExport["# Diagnoses"] = physioCase.Diagnoses.Count;
myExport["Runtime(ms)"] = time;
myExport["# Iterations"] = iterationCounter;
myExport["Cost"] = totalCost;
myExport["# Fixed Components"] = numberOfFixed;
myExport["# Expanded In First Iteration"] = expanded;
myExport["Found Opt"] = foundOpt;
}
string fileName = "Physiotherapy " + planner.Type() + "_o=" + overhead;
if (maxNumOfDiag > 0)
{
fileName += "_MaxDiag" + maxNumOfDiag;
}
myExport.ExportToFile(fileName + ".csv");
planner.CreateIterationDetailsFile(fileName + "_IterationDetails");
}
public PhysioCaseInstance ParseCase(string fileName)
{
char[] delrow = new char[1];
delrow[0] = ',';
int progress = 0;
PhysioCaseInstance ans = new PhysioCaseInstance();
//extract case number from fileName
string caseNumber = fileName.Substring(fileName.LastIndexOf('_') + 1);
caseNumber = caseNumber.Substring(0, caseNumber.IndexOf(".txt"));
int num;
if (Int32.TryParse(caseNumber, out num))
{
ans.Id = num;
}
FileStream fs = new FileStream(fileName, FileMode.Open, FileAccess.Read);
StreamReader reader = new StreamReader(fs);
while (!reader.EndOfStream && progress < 3)
{
string line = reader.ReadLine();
if (string.IsNullOrEmpty(line))
{
continue;
}
//read real
if (progress == 0)
{
ans.RealDiagnosis = new Diagnosis();
List <string> realDiagComps = line.Split(delrow, StringSplitOptions.RemoveEmptyEntries).ToList();
foreach (string c in realDiagComps)
{
PhysioComp comp = new PhysioComp(c);
ans.RealDiagnosis.AddCompToDiagnosis(comp);
}
progress++;
ans.RealDiagCardinality = ans.RealDiagnosis.Diag.Count;
}
//read obs
else if (progress == 1)
{
ans.Observation = new List <PhysioComp>();
List <string> obs = line.Split(delrow, StringSplitOptions.RemoveEmptyEntries).ToList();
foreach (string c in obs)
{
PhysioComp comp = new PhysioComp(c);
ans.Observation.Add(comp);
}
progress++;
}
//read diagnoses
else if (progress == 2)
{
ans.Diagnoses = new DiagnosisSet();
do
{
Diagnosis diag = new Diagnosis();
List <string> diagComps = line.Split(delrow, StringSplitOptions.RemoveEmptyEntries).ToList();
foreach (string c in diagComps)
{
PhysioComp comp = new PhysioComp(c);
diag.AddCompToDiagnosis(comp);
}
if (diag.Diag.Count > 0)
{
ans.Diagnoses.AddDiagnosis(diag);
}
if (reader.EndOfStream)
{
break;
}
line = reader.ReadLine();
}while (!string.IsNullOrEmpty(line));
progress++;
}
}
if (progress > 2 && ans.ValidCaseInstance())
{
int maxCard = ans.RealDiagCardinality;
int minCard = ans.RealDiagCardinality;
foreach (Diagnosis diag in ans.Diagnoses.Diagnoses)
{
int card = diag.Diag.Count;
if (card > maxCard)
{
maxCard = card;
}
if (card < minCard)
{
minCard = card;
}
}
ans.MaxCardinality = maxCard;
ans.MinCardinality = minCard;
return(ans);
}
return(null);
}
