/// <summary>
/// Constructor for Dispersal: fills the list of available implementations of dispersal
/// </summary>
public Dispersal(Boolean DrawRandomly, string globalModelTimeStepUnit, MadingleyModelInitialisation modelInitialisation)
{
// Initialise the list of dispersal implementations
Implementations = new SortedList<string, IDispersalImplementation>();
// Add the basic advective dispersal implementation to the list of implementations
AdvectiveDispersal AdvectiveDispersalImplementation = new AdvectiveDispersal(globalModelTimeStepUnit, DrawRandomly);
Implementations.Add("basic advective dispersal", AdvectiveDispersalImplementation);
// Add the basic advective dispersal implementation to the list of implementations
DiffusiveDispersal DiffusiveDispersalImplementation = new DiffusiveDispersal(globalModelTimeStepUnit, DrawRandomly);
Implementations.Add("basic diffusive dispersal", DiffusiveDispersalImplementation);
// Add the basic advective dispersal implementation to the list of implementations
ResponsiveDispersal ResponsiveDispersalImplementation = new ResponsiveDispersal(globalModelTimeStepUnit, DrawRandomly);
Implementations.Add("basic responsive dispersal", ResponsiveDispersalImplementation);
// Get the weight threshold below which organisms are dispersed planktonically
PlanktonThreshold = modelInitialisation.PlanktonDispersalThreshold;
}
/// <summary>
/// Constructor for Dispersal: fills the list of available implementations of dispersal
/// </summary>
public Dispersal(Boolean DrawRandomly, string globalModelTimeStepUnit, MadingleyModelInitialisation modelInitialisation)
{
// Initialise the list of dispersal implementations
Implementations = new SortedList <string, IDispersalImplementation>();
// Add the basic advective dispersal implementation to the list of implementations
AdvectiveDispersal AdvectiveDispersalImplementation = new AdvectiveDispersal(globalModelTimeStepUnit, DrawRandomly);
Implementations.Add("basic advective dispersal", AdvectiveDispersalImplementation);
// Add the basic advective dispersal implementation to the list of implementations
DiffusiveDispersal DiffusiveDispersalImplementation = new DiffusiveDispersal(globalModelTimeStepUnit, DrawRandomly);
Implementations.Add("basic diffusive dispersal", DiffusiveDispersalImplementation);
// Add the basic advective dispersal implementation to the list of implementations
ResponsiveDispersal ResponsiveDispersalImplementation = new ResponsiveDispersal(globalModelTimeStepUnit, DrawRandomly);
Implementations.Add("basic responsive dispersal", ResponsiveDispersalImplementation);
// Get the weight threshold below which organisms are dispersed planktonically
PlanktonThreshold = modelInitialisation.PlanktonDispersalThreshold;
}
/// <summary>
/// Copy parameter values to a text file in the specified output directory
/// </summary>
/// <param name="outputDirectory">THe directory for outputs</param>
public void CopyParameterValues(string outputDirectory)
{
// Create a stream write object to write the parameter values to
StreamWriter sw = new StreamWriter(outputDirectory + "Parameters.txt");
// Write out the column headings
sw.WriteLine("Ecological process\tParameter name\tParameter value");
// Create dummy instances of the ecological processes
RevisedHerbivory DummyHerbivory = new RevisedHerbivory(0.0, _GlobalModelTimeStepUnit);
RevisedPredation DummyPredation = new RevisedPredation(0.0, _GlobalModelTimeStepUnit);
MetabolismEndotherm DummyEndoMetabolism = new MetabolismEndotherm(_GlobalModelTimeStepUnit);
MetabolismEctotherm DummyEctoMetabolism = new MetabolismEctotherm(_GlobalModelTimeStepUnit);
BackgroundMortality DummyBackgroundMortality = new BackgroundMortality(_GlobalModelTimeStepUnit);
SenescenceMortality DummySenescenceMortality = new SenescenceMortality(_GlobalModelTimeStepUnit);
StarvationMortality DummyStarvationMortality = new StarvationMortality(_GlobalModelTimeStepUnit);
ReproductionBasic DummyReproduction = new ReproductionBasic(_GlobalModelTimeStepUnit, _DrawRandomly);
DiffusiveDispersal DummyDiffusiveDispersal = new DiffusiveDispersal(_GlobalModelTimeStepUnit, _DrawRandomly);
RevisedTerrestrialPlantModel DummyPlantModel = new RevisedTerrestrialPlantModel();
Activity DummyActivityModel = new Activity();
// Call the methods in these processes that write the parameter values out
DummyHerbivory.WriteOutParameterValues(sw);
DummyPredation.WriteOutParameterValues(sw);
DummyEndoMetabolism.WriteOutParameterValues(sw);
DummyEctoMetabolism.WriteOutParameterValues(sw);
DummyBackgroundMortality.WriteOutParameterValues(sw);
DummySenescenceMortality.WriteOutParameterValues(sw);
DummyStarvationMortality.WriteOutParameterValues(sw);
DummyReproduction.WriteOutParameterValues(sw);
DummyDiffusiveDispersal.WriteOutParameterValues(sw);
DummyPlantModel.WriteOutParameterValues(sw);
DummyActivityModel.WriteOutParameterValues(sw);
sw.Dispose();
}
