public PreferrenceEstimation(WorkSpace workspace)
{
// _selectedSubjectName = workspace.SelectedSubject;
dtPeptides = workspace.GetPeptidesDataTable();
dtProteins = workspace.GetProteinsDataTable();
_firstPosition = workspace.FirstPosition;
_lastPosition = workspace.LastPosition;
_totalPositions = workspace.SingleSidePeptideSize + workspace.SingleSidePeptideSize + 1;
peArg = new PreferrenceEstimationEventArgs();
peArg.TargetOfStudy = workspace.SelectedSubject;
_setOfAminoAcids = new List <string>();
_setOfAminoAcids.AddRange(workspace.SetOfAminoAcid);
_subjectPositionIsTheMemberOfPeptide = workspace.SubjectPositionIsTheMemberOfPeptide;
_subjectPosition = workspace.SubjectPosition;
workspace = null;
this._CountPerAminoAcid = new double[this.TotalAminoAcids];
this._ExpectedCount = new double[this.TotalAminoAcids];
this._ExpectedFrequency = new double[this.TotalAminoAcids];
this._ObservedCount = new double[this.TotalAminoAcids, this._totalPositions];
this._ObservedFrequency = new double[this.TotalAminoAcids, this._totalPositions];
this._DeviationParameter = new double[this.TotalAminoAcids, this._totalPositions];
this._DOEC = new double[this.TotalAminoAcids, this._totalPositions];
this._Sigma = new double[this.TotalAminoAcids, this._totalPositions];
this._PreferredSites = new double[this.TotalAminoAcids, this._totalPositions];
this._SPreferredSites = new double[this.TotalAminoAcids, this._totalPositions];
}
public void OnPreferrenceEstimationProgressUpdate(object sender, EventArgs e)
{
progressStatus = (PreferrenceEstimationEventArgs)e;
lblStatus.Text = progressStatus.Status;
progressBar1.Value = progressStatus.Progress;
Text = progressStatus.TargetOfStudy;
progressStatus = null;
Application.DoEvents();
}
public void Dispose()
{
Dispose(true);
peArg = null;
GC.SuppressFinalize(this);
}