public AlignSortedIntervals(SortedIntervals <TFirst> firstIntervals,
SortedIntervals <TSecond> secondIntervals, Func <TFirst[], TSecond[], TResult> selector)
{
_firstIntervals = firstIntervals;
_secondIntervals = secondIntervals;
_selector = selector;
}
public static string Replace <T>(this string s, SortedIntervals <T> intervals, Func <Interval <T>, string> replacement)
{
var sb = new StringBuilder();
try
{
var idx = 0;
Interval <T> lastInterval = null;
foreach (var interval in intervals)
{
if (lastInterval != null && interval.Start < lastInterval.End)
{
throw new ArgumentException("Intervals should not overlap.");
}
sb.Append(s.Substring(idx, interval.Start - idx));
string replace = replacement(interval) ?? s.Substring(interval);
sb.Append(replace);
idx = interval.End;
lastInterval = interval;
}
sb.Append(s.Substring(idx, s.Length - idx));
}
catch (ArgumentOutOfRangeException e)
{
throw new ArgumentOutOfRangeException("Interval exceeding string dimensions.", e);
}
return(sb.ToString());
}
private static IEnumerable <List <IInterval <T> > > UnionEnumerator <T>(this SortedIntervals <T> intervals)
{
var currentGroup = new List <IInterval <T> >();
int lastEnd = int.MinValue;
foreach (var interval in intervals)
{
if (lastEnd == int.MinValue || interval.Start <= lastEnd)
{
currentGroup.Add(interval);
}
else
{
yield return(currentGroup);
currentGroup = new List <IInterval <T> >()
{
interval
};
}
lastEnd = Math.Max(lastEnd, interval.End);
}
if (currentGroup.Count > 0)
{
yield return(currentGroup);
}
}
private static IEnumerable <Interval <T> > RemoveCoveredEnumerator <T>(this SortedIntervals <T> intervals,
ContainsMode mode = ContainsMode.NON_STRICT)
{
IInterval <T> current = null;
foreach (var interval in intervals)
{
if (current == null)
{
current = interval;
}
else if (!current.Contains(interval, mode))
{
yield return(interval);
current = interval;
}
}
}
public static IEnumerable <T> Replace <T>(this IEnumerable <T> ts, SortedIntervals <T[]> intervals)
{
var enumerator = ts.GetEnumerator();
var idx = 0;
Interval <T[]> lastInterval = null;
foreach (var interval in intervals)
{
if (lastInterval != null && interval.Start < lastInterval.End)
{
throw new ArgumentException("Intervals should not overlap.");
}
// Yield elements before interval starts
for (int i = 0; i < interval.Start - idx; i++)
{
enumerator.MoveNext();
yield return(enumerator.Current);
}
// Skip elements covered by interval
for (int i = 0; i < interval.Length; i++)
{
enumerator.MoveNext();
}
// Yield elements in interval value
foreach (var elem in interval.Value())
{
yield return(elem);
}
idx = interval.End;
lastInterval = interval;
}
// Yield elements after last interval end
while (enumerator.MoveNext())
{
yield return(enumerator.Current);
}
}
public static IEnumerable <Interval <T[]> > GroupMergedEnumerator <T>(this SortedIntervals <T> intervals)
{
var group = new List <Interval <T> >();
foreach (var interval in intervals)
{
if (group.Count > 0 && !group[0].Equals(interval))
{
yield return(new Interval <T[]>(group[0], group.Values().ToArray()));
group = new List <Interval <T> >();
}
group.Add(interval);
}
if (group.Count > 0)
{
yield return(new Interval <T[]>(group[0], group.Values().ToArray()));
}
}
public static SortedIntervals <T> Inside <T>(this SortedIntervals <T> intervals, IInterval range,
IIntervalInclusionComparer comparer = null)
{
return(new SortedIntervals <T>(intervals.AsEnumerable().Inside(range, comparer)));
}
public static SortedIntervals <T> Translate <T>(this SortedIntervals <T> intervals, int value)
{
return(new SortedIntervals <T>(intervals.AsEnumerable().Translate(value)));
}
public static SortedIntervals <U> Map <T, U>(this SortedIntervals <T> intervals, Func <T, U> selector)
{
return(new SortedIntervals <U>(intervals.ToIntervals().Map(selector)));
}
public static SortedIntervals <TResult> Align <TFirst, TSecond, TResult>(
this SortedIntervals <TFirst> intervals, SortedIntervals <TSecond> otherIntervals,
Func <TFirst[], TSecond[], TResult> selector)
{
return(new AlignSortedIntervals <TFirst, TSecond, TResult>(intervals, otherIntervals, selector).Execute());
}
public static SortedIntervals <U> Union <T, U>(this SortedIntervals <T> intervals, Func <IEnumerable <T>, U> reduce)
{
return(new SortedIntervals <U>(intervals.UnionEnumerator().Select(g => g.Range(reduce))));
}
public static SortedIntervals <T[]> Union <T>(this SortedIntervals <T> intervals)
{
return(new SortedIntervals <T[]>(intervals.UnionEnumerator().Select(g => g.Range())));
}
/// <summary>
/// Filter out the intervals that are entirely covered by another interval, if provided
/// condition is satisfied. The condition's first parameter is the covering interval,
/// the second one is the covered interval. If the condition function returns `true` the
/// covered interval will be removed.
/// </summary>
public static SortedIntervals <T> RemoveCovered <T>(this SortedIntervals <T> intervals,
Func <T, T, bool> condition, ContainsMode mode = ContainsMode.NON_STRICT)
{
return(new SortedIntervals <T>(RemoveCoveredEnumerator(intervals, condition, mode)));
}
public static Alignment <T, T[]> AlignReplace <T>(this T[] ts, SortedIntervals <T[]> intervals)
{
var builder = new List <T>();
string toString;
var intervalAlignments = new List <IntervalAlignment <T[]> >();
var mappings = new Dictionary <int, int>();
try
{
var leftIdx = 0;
var rightIdx = 0;
mappings.Add(0, 0);
Interval <T[]> lastInterval = null;
foreach (var interval in intervals)
{
if (lastInterval != null && interval.Start < lastInterval.End)
{
throw new ArgumentException("Intervals should not overlap.");
}
// Append string segment before interval
T[] before = ts.SubArray(leftIdx, interval.Start - leftIdx);
builder.AddRange(before);
int shift = rightIdx - leftIdx;
for (int i = 0; i < before.Length; i++)
{
var beforeInterval = new Interval <T[]>(leftIdx + i, 1, new[] { before[i] });
intervalAlignments.Add(new IntervalAlignment <T[]>(beforeInterval,
beforeInterval.Translate(shift), true));
}
rightIdx += before.Length;
var leftContent = ts.SubArray(interval);
// Append string replacement
var rightContent = interval.Value;
builder.AddRange(rightContent);
// Store from and to intervals
var leftInterval = new Interval <T[]>(interval, leftContent);
var rightInterval = new Interval <T[]>(start: rightIdx, length: rightContent.Length, value: interval.Value);
intervalAlignments.Add(new IntervalAlignment <T[]>(leftInterval, rightInterval, false));
// Store mappings for intervals start and end positions
mappings[interval.Start] = rightInterval.Start;
mappings[interval.End] = rightInterval.End;
leftIdx = interval.End;
rightIdx = rightInterval.End;
lastInterval = interval;
}
// Append string segment after last interval
var final = ts.SubArray(leftIdx, ts.Length - leftIdx);
builder.AddRange(final);
int shift2 = rightIdx - leftIdx;
for (int i = 0; i < final.Length; i++)
{
var finalInterval = new Interval <T[]>(leftIdx + i, 1, new[] { final[i] });
intervalAlignments.Add(new IntervalAlignment <T[]>(finalInterval,
finalInterval.Translate(shift2), true));
}
// Finalize TO string and store mapping for end of strings
toString = builder.ToString();
mappings[ts.Length] = toString.Length;
}
catch (ArgumentOutOfRangeException e)
{
throw new ArgumentOutOfRangeException("Interval exceeding string dimensions.", e);
}
return(new Alignment <T, T[]>(
left: ts,
right: builder.ToArray(),
intervals: intervalAlignments.ToArray(),
mappings: mappings));
}
public static Alignment <T> AlignReplace <T>(this string s, SortedIntervals <T> intervals, Func <string, string> replacement)
{
var sb = new StringBuilder();
string toString;
var intervalAlignments = new List <IntervalAlignment <T> >();
var mappings = new Dictionary <int, int>();
try
{
var fromIdx = 0;
var toIdx = 0;
mappings.Add(0, 0);
Interval <T> lastInterval = null;
foreach (var fromInterval in intervals)
{
if (lastInterval != null && fromInterval.Start < lastInterval.End)
{
throw new ArgumentException("Intervals should not overlap.");
}
// Append string segment before interval
string before = s.Substring(fromIdx, fromInterval.Start - fromIdx);
sb.Append(before);
toIdx += before.Length;
var fromContent = s.Substring(fromInterval);
// Append string replacement
var toContent = replacement(fromContent);
sb.Append(toContent);
// Store from and to intervals
var toInterval = new Interval <T>(start: toIdx, length: toContent.Length, value: fromInterval.Value);
intervalAlignments.Add(new IntervalAlignment <T>(fromInterval, toInterval, false));
// Store mappings for intervals start and end positions
mappings[fromInterval.Start] = toInterval.Start;
mappings[fromInterval.End] = toInterval.End;
fromIdx = fromInterval.End;
toIdx = toInterval.End;
lastInterval = fromInterval;
}
// Append string segment after last interval
sb.Append(s.Substring(fromIdx, s.Length - fromIdx));
// Finalize TO string and store mapping for end of strings
toString = sb.ToString();
mappings[s.Length] = toString.Length;
}
catch (ArgumentOutOfRangeException e)
{
throw new ArgumentOutOfRangeException("Interval exceeding string dimensions.", e);
}
return(new Alignment <T>(
left: s,
right: sb.ToString(),
intervals: intervalAlignments.ToArray(),
mappings: mappings));
}
public static SortedIntervals <T> IntersectingWith <T>(this SortedIntervals <T> intervals,
IEnumerable <IInterval> others, ContainsMode mode = ContainsMode.NON_STRICT)
{
return(new SortedIntervals <T>(intervals.AsEnumerable().IntersectingWith(others, mode)));
}
/// <summary>
/// Filter out the intervals that are entirely covered by another interval.
/// </summary>
/// <typeparam name="T"></typeparam>
/// <param name="intervals"></param>
/// <returns></returns>
public static SortedIntervals <T> RemoveCovered <T>(this SortedIntervals <T> intervals,
ContainsMode mode = ContainsMode.NON_STRICT)
{
return(new SortedIntervals <T>(RemoveCoveredEnumerator(intervals, mode)));
}
public static SortedIntervals <T> IntersectWith <T>(this SortedIntervals <T> intervals, IInterval range)
{
return(new SortedIntervals <T>(intervals.AsEnumerable().IntersectWith(range)));
}
public static SortedIntervals <T[]> GroupMerged <T>(this SortedIntervals <T> intervals)
{
return(new SortedIntervals <T[]>(GroupMergedEnumerator(intervals)));
}
public static string Replace <T>(this string s, SortedIntervals <T> intervals, Func <T, string> replacement)
{
return(s.Replace(intervals, i => replacement(i.Value)));
}
