/// <summary>
/// Plots the results.
/// </summary>
/// <returns>The results.</returns>
/// <param name="numBases">Number of bases.</param>
/// <param name="signalWidth">The signal width.</param>
/// <param name="dictionary">Dictionary.</param>
/// <param name="coefficients">Coefficients.</param>
/// <param name="st">Sub title.</param>
/// <param name="plotOptions">Plotting options.</param>
public static void PlotResults(
int numBases, int signalWidth,
Gaussian[][] dictionary, VectorGaussian[] coefficients,
string st, PlotOptions plotOptions)
{
var coef = coefficients.Select(DistributionHelpers.IndependentApproximation).ToArray();
PlotResults(numBases, signalWidth, dictionary, coef, st, plotOptions);
}
/// <summary>
/// Plots the results.
/// </summary>
/// <returns>The results.</returns>
/// <param name="numBases">Number of bases.</param>
/// <param name="signalWidth">The signal width.</param>
/// <param name="dictionary">Dictionary.</param>
/// <param name="coefficients">Coefficients.</param>
/// <param name="st">Sub title.</param>
/// <param name="plotOptions">Plotting options.</param>
public static void PlotResults(
int numBases, int signalWidth,
VectorGaussian[] dictionary, VectorGaussian[] coefficients,
string st, PlotOptions plotOptions)
{
// Note the dictionary is transposed in this case
var dict = dictionary.Select(DistributionHelpers.IndependentApproximation).ToArray().Transpose();
var coef = coefficients.Select(DistributionHelpers.IndependentApproximation).ToArray();
PlotResults(numBases, signalWidth, dict, coef, st, plotOptions);
}
/// <summary>
/// Plots the reconstructions.
/// </summary>
/// <returns>The reconstructions.</returns>
/// <param name="reconstructions">Reconstructions.</param>
/// <param name="averageError">The average reconstruction error.</param>
/// <param name="subTitle">Sub title.</param>
/// <param name="normalised">Whether these are normalised reconstructions.</param>
/// <param name="plotOptions">Plotting options.</param>
public static void PlotReconstructions(Reconstruction[] reconstructions, double averageError, string subTitle,
bool normalised, PlotOptions plotOptions)
{
if (plotOptions.IsImage)
{
PlotImageReconstructions(reconstructions, averageError, subTitle, normalised, plotOptions);
return;
}
var series1 = reconstructions.Take(plotOptions.Reconstructions.NumToShow).Select(
(ia, i) => (ISeries)(new LineSeries
{
Label = "signal",
X = ia.Signal,
Row = i / plotOptions.Reconstructions.Subplots.Columns,
Column = i % plotOptions.Reconstructions.Subplots.Columns
})).ToArray();
var series2 = reconstructions.Take(plotOptions.Reconstructions.NumToShow).Select(
(ia, i) => (ISeries)(new ErrorLineSeries
{
Label = "reconstruction",
ErrorLabel = "$\\pm$s.d.",
X = ia.Estimate.GetMeans(),
ErrorValues = ia.Estimate.GetStandardDeviations(),
Row = i / plotOptions.Reconstructions.Subplots.Columns,
Column = i % plotOptions.Reconstructions.Subplots.Columns
})).ToArray();
IList <ISeries> series = series1.Concat(series2).ToArray();
string n = normalised ? " (normalised)" : string.Empty;
// var series = new[] { new LineSeries { X = x1, Row = 0 }, new LineSeries { X = x2, Row = 1 } };
string sub = string.IsNullOrEmpty(subTitle) ? string.Empty : $"_{subTitle.Replace(" ", "_")}";
var plotter = new Plotter
{
Title = $"Reconstructions{n}, RMSE={averageError:N4}",
XLabel = "x",
YLabel = "y",
Series = series,
Subplots = plotOptions.Reconstructions.Subplots,
ScriptName = Path.Combine(ScriptPath, $"Reconstructions_{n}{sub}.py"),
FigureName = Path.Combine(FigurePath, $"Reconstructions_{n}{sub}.pdf"),
Python = PythonPath,
Show = plotOptions.Reconstructions.Show
};
plotter.Plot();
}
/// <summary>
/// Plots the results.
/// </summary>
/// <returns>The results.</returns>
/// <param name="numBases">Number of bases.</param>
/// <param name="signalWidth">The signal width.</param>
/// <param name="dictionary">Dictionary.</param>
/// <param name="coefficients">Coefficients.</param>
/// <param name="st">Sub title.</param>
/// <param name="plotOptions">The plotting options.</param>
/// <param name="labels">Class labels.</param>
public static void PlotResults(
int numBases, int signalWidth,
Gaussian[][][] dictionary, Gaussian[][][] coefficients,
string st, PlotOptions plotOptions, IList <string> labels)
{
var subplots = new Subplots
{
ShareX = true,
ShareY = true,
Rows = numBases < 16 ? numBases : 4,
Columns = numBases < 16 ? 1 : 4,
};
plotOptions.Dictionary.Subplots = subplots;
plotOptions.Dictionary.NumToShow = plotOptions.IsImage ? 1 : Math.Min(numBases, 16);
for (var i = 0; i < dictionary.Length; i++)
{
string label = "Dictionary_class=" + (labels == null ? $"{i}" : labels[i]);
if (plotOptions.IsImage)
{
PlotImages(dictionary[i], signalWidth, label, plotOptions.Dictionary);
}
else
{
PlotPosteriors(dictionary[i], label, st, plotOptions.Dictionary);
}
}
if (coefficients == null)
{
return;
}
subplots.Rows = 3;
subplots.Columns = 2;
plotOptions.Coefficients.NumToShow = 6;
plotOptions.Coefficients.Subplots = subplots;
for (var i = 0; i < coefficients.Length; i++)
{
var coefficient = coefficients[i];
string label = "Coefficients_class={label}" + (labels == null ? $"{i}" : labels[i]);
PlotPosteriors(coefficient, label, st, plotOptions.Coefficients);
}
}
/// <summary>
/// Plots the results.
/// </summary>
/// <returns>The results.</returns>
/// <param name="numBases">Number of bases.</param>
/// <param name="signalWidth">The signal width.</param>
/// <param name="dictionary">Dictionary.</param>
/// <param name="coefficients">Coefficients.</param>
/// <param name="st">Sub title.</param>
/// <param name="plotOptions">The plotting options.</param>
public static void PlotResults(
int numBases, int signalWidth,
Gaussian[][] dictionary, Gaussian[][] coefficients,
string st, PlotOptions plotOptions)
{
var subplots = new Subplots
{
ShareX = true,
ShareY = true,
Rows = numBases < 16 ? numBases : 4,
Columns = numBases < 16 ? 1 : 4
};
plotOptions.Dictionary.Subplots = subplots;
plotOptions.Dictionary.NumToShow = plotOptions.IsImage ? 1 : Math.Min(numBases, 16);
if (plotOptions.IsImage)
{
PlotImages(dictionary, signalWidth, "Dictionary", plotOptions.Dictionary);
}
else
{
PlotPosteriors(dictionary, "Dictionary", st, plotOptions.Dictionary);
}
if (coefficients == null)
{
return;
}
subplots.Rows = 3;
subplots.Columns = 2;
plotOptions.Coefficients.NumToShow = 6;
plotOptions.Coefficients.Subplots = subplots;
PlotPosteriors(coefficients, "Coefficients", st, plotOptions.Coefficients);
}
/// <summary>
/// Plots the image reconstructions. Note that we assume the images are square
/// </summary>
/// <returns>The reconstructions.</returns>
/// <param name="reconstructions">Reconstructions.</param>
/// <param name="averageError">The average reconstruction error.</param>
/// <param name="subTitle">Sub title.</param>
/// <param name="normalised">Whether these are normalised reconstructions.</param>
/// <param name="plotOptions">Plotting options.</param>
public static void PlotImageReconstructions(Reconstruction[] reconstructions, double averageError,
string subTitle, bool normalised, PlotOptions plotOptions)
{
var series1 = reconstructions.Take(plotOptions.Reconstructions.NumToShow).Select(
(ia, i) => (ISeries) new HintonSeries
{
Label = "signal",
Values = Reshape(Vector.Build.Dense(ia.Signal)),
Row = i,
Column = 0
}).ToArray();
var series2 = reconstructions.Take(plotOptions.Reconstructions.NumToShow).Select(
(ia, i) => (ISeries) new HintonSeries
{
Label = "reconstruction",
// ErrorLabel = "$\\pm$s.d.",
Values = Reshape(Vector.Build.Dense(ia.Estimate.GetMeans())),
// ErrorValues = ia.Estimate.GetStandardDeviations(),
Row = i,
Column = 1
}).ToArray();
IList <ISeries> series = series1.Concat(series2).ToArray();
string n = normalised ? "(normalised)" : string.Empty;
var subplots = new Subplots {
Rows = plotOptions.Reconstructions.NumToShow, Columns = 2, ShareX = false, ShareY = false
};
string sub1 = string.IsNullOrEmpty(subTitle) ? string.Empty : $" {subTitle.Replace("_", " ")}";
string sub2 = string.IsNullOrEmpty(subTitle) ? string.Empty : $"_{subTitle.Replace(" ", "_")}";
string message = $"Reconstructions {n}{sub1}, avg. error={averageError:N4}";
Console.WriteLine(message);
var plotter = new Plotter
{
Title = message,
XLabel = "x",
YLabel = "y",
Grid = false,
Series = series,
Subplots = subplots,
ScriptName = Path.Combine(ScriptPath, $"Reconstructions_{n}{sub2}.py"),
FigureName = Path.Combine(FigurePath, $"Reconstructions_{n}{sub2}.pdf"),
Python = PythonPath,
Show = plotOptions.Reconstructions.Show
};
plotter.Plot();
}
/// <summary>
/// Plots the functions.
/// </summary>
/// <param name="functions">The functions to plot.</param>
/// <param name="title">The plot title..</param>
/// <param name="subTitle">Sub title.</param>
/// <param name="options">The plotting options.</param>
public static void PlotFunctions(Matrix functions, string title, string subTitle, PlotOptions options)
{
if (options.IsImage)
{
PlotImages(functions, title, options.Images);
return;
}
var series = CreateSeries(functions.ToRowArrays(), null, options.Signals);
var plotter = new Plotter
{
Title = title + (string.IsNullOrEmpty(subTitle) ? string.Empty : " " + subTitle),
XLabel = "x", YLabel = "y",
Series = series, Subplots = options.Signals.Subplots,
ScriptName = Path.Combine(ScriptPath, title + ".py"),
FigureName = Path.Combine(FigurePath, title + ".pdf"),
Python = PythonPath
};
plotter.Plot();
}