Ejemplo n.º 1
0
        private void mnuItemFilterpq_Click(object sender, EventArgs e)
        {
            string filtTableName = null;

            if (!mhtDatasets.ContainsKey("p-Values"))
            {
                MessageBox.Show("'p-Values' table not found; cannot filter using ANOVA results", "Error");
                return;
            }

            var anovaParams = new frmFilterAnova
            {
                PopulateDataComboBox = AvailableDataSources()
            };

            var pvaluesTable = mhtDatasets["p-Values"];

            anovaParams.PopulateListBox = clsDataTable.DataTableColumns(pvaluesTable.mDTable, true);

            if (anovaParams.ShowDialog() == DialogResult.OK)
            {
                var    column         = anovaParams.SelectedColumn + 1;
                var    datasetNameInR = (mhtDatasets[anovaParams.Dataset]).mstrRdatasetName;
                var    thres          = anovaParams.Thres.ToString(CultureInfo.InvariantCulture);
                string ltgt;
                if (anovaParams.LessThan)
                {
                    ltgt = @"smode=""LT""";
                }
                else
                {
                    ltgt = @"smode=""GT""";
                }

                var rcmd = "filterResult <- filterAnova(pvalues," + datasetNameInR + "," + thres + "," +
                           column + "," + ltgt + ")";

                bool executionError;
                bool dataNotFound;
                try
                {
                    mintFilterTblNum++;
                    filtTableName = "filteredData" + mintFilterTblNum.ToString();
                    mRConnector.EvaluateNoReturn(rcmd);
                    mRConnector.EvaluateNoReturn("err<-filterResult$error");
                    mRConnector.EvaluateNoReturn("nodata<-filterResult$NoData");
                    mRConnector.EvaluateNoReturn(filtTableName + "<-filterResult$Filtered");
                    executionError = mRConnector.GetSymbolAsBool("err");
                    dataNotFound   = mRConnector.GetSymbolAsBool("nodata");
                }
                catch (Exception ex)
                {
                    Console.WriteLine(ex.Message);
                    executionError = true;
                    dataNotFound   = true;
                }
                if (executionError || dataNotFound)
                {
                    MessageBox.Show("No matches found. Check if you selected the correct dataset or" +
                                    Environment.NewLine + "if your cutoff is too conservative.",
                                    "Problem...", MessageBoxButtons.OK, MessageBoxIcon.Exclamation);
                }
                else if (mRConnector.GetTableFromRmatrix(filtTableName))
                {
                    var filteredDataFromR = mRConnector.DataTable.Copy();
                    filteredDataFromR.TableName             = filtTableName;
                    filteredDataFromR.Columns[0].ColumnName = "ID";
                    AddDataset2HashTable(filteredDataFromR);
                    if (mhtDatasets.ContainsKey("Filtered Data" + mintFilterTblNum))
                    {
                        AddDataNode(mhtDatasets["Filtered Data" + mintFilterTblNum]);
                    }
                }
            }
        }
Ejemplo n.º 2
0
        private void mnuItemFilterpq_Click(object sender, EventArgs e)
        {
            string filtTableName = null;

            if (!mhtDatasets.ContainsKey("p-Values"))
            {
                MessageBox.Show("'p-Values' table not found; cannot filter using ANOVA results", "Error");
                return;
            }

            var mfrmFilterANOVA = new frmFilterAnova
            {
                PopulateDataComboBox = AvailableDataSources()
            };

            var mclsAnova = mhtDatasets["p-Values"];
            mfrmFilterANOVA.PopulateListBox = clsDataTable.DataTableColumns(mclsAnova.mDTable, true);

            if (mfrmFilterANOVA.ShowDialog() == DialogResult.OK)
            {
                var column = mfrmFilterANOVA.SelectedColumn + 1;
                var datasetNameInR = (mhtDatasets[mfrmFilterANOVA.Dataset]).mstrRdatasetName;
                var thres = mfrmFilterANOVA.Thres.ToString(CultureInfo.InvariantCulture);
                string ltgt;
                if (mfrmFilterANOVA.LessThan)
                    ltgt = @"smode=""LT""";
                else
                    ltgt = @"smode=""GT""";

                var rcmd = "filterResult <- filterAnova(pvalues," + datasetNameInR + "," + thres + "," +
                              column.ToString() + "," + ltgt + ")";
                var mblErr = true;
                var mblNoData = true;
                try
                {
                    mintFilterTblNum++;
                    filtTableName = "filteredData" + mintFilterTblNum.ToString();
                    mRConnector.EvaluateNoReturn(rcmd);
                    mRConnector.EvaluateNoReturn("err<-filterResult$error");
                    mRConnector.EvaluateNoReturn("nodata<-filterResult$NoData");
                    mRConnector.EvaluateNoReturn(filtTableName + "<-filterResult$Filtered");
                    mblErr = mRConnector.GetSymbolAsBool("err");
                    mblNoData = mRConnector.GetSymbolAsBool("nodata");
                }
                catch (Exception ex)
                {
                    Console.WriteLine(ex.Message);
                    mblErr = true;
                    mblNoData = true;
                }
                if (mblErr || mblNoData)
                    MessageBox.Show("No matches found. Check if you selected the correct dataset or" +
                                    Environment.NewLine + "if your cutoff is too conservative.",
                                    "Problem...", MessageBoxButtons.OK, MessageBoxIcon.Exclamation);
                else if (mRConnector.GetTableFromRmatrix(filtTableName))
                {
                    var mDTfiltered = mRConnector.DataTable.Copy();
                    mDTfiltered.TableName = filtTableName;
                    mDTfiltered.Columns[0].ColumnName = "ID";
                    AddDataset2HashTable(mDTfiltered);
                    if (mhtDatasets.ContainsKey("Filtered Data" + mintFilterTblNum))
                        AddDataNode(mhtDatasets["Filtered Data" + mintFilterTblNum]);
                }
            }
        }