public ICoverageBigWigWriter CreateBinCoverageBigWigWriter(IBedGraphWriter bedGraphWriter)
{
var calculator = new NormalizedBinsCoverageCalculator();
var bedGraphWriterFacade = new CoverageBedGraphWriter(bedGraphWriter, calculator);
return(new CoverageBigWigWriter(_logger, bedGraphWriterFacade, GetConverter(), _genome));
}
public CoverageBedGraphWriter CreateSegmentBedGraphWriter(IBedGraphWriter bedGraphWriter)
{
var calculator = new NormalizedSegmentsCoverageCalculator();
var bedGraphWriterFacade = new CoverageBedGraphWriter(bedGraphWriter, calculator);
return(bedGraphWriterFacade);
}
public CoverageBigWigWriter(ILogger logger, CoverageBedGraphWriter writer, IBedGraphToBigWigConverter converter, GenomeMetadata genome)
{
_logger = logger;
_writer = writer;
_converter = converter;
_genome = genome;
}