public override string ToString()
{
string result = "";
for (int i = 0; i < (Content.Length - 1); i += 2)
{
result += DnaChar.BitsToChar(Content[i], Content[i + 1]);
}
return(result);
}
public string ReverseComplement(string pattern)
{
var sb = new StringBuilder(pattern);
for (int i = 0; i < sb.Length; i++)
{
sb[i] = DnaChar.Flip(sb[i]);
}
char[] arr = sb.ToString().ToArray();
Array.Reverse(arr);
return(new string(arr));
}
internal DnaString GetReverseComplement()
{
var result = new DnaString(Length);
for (int i = 0; i < (Content.Length - 1); i += 2)
{
bool[] b = DnaChar.Flip(Content[result.Content.Length - i - 2],
Content[result.Content.Length - i - 1]);
result.Content[i] = b[0];
result.Content[i + 1] = b[1];
}
return(result);
}
public DnaString(string s)
{
var bits = new bool[s.Length * 2];
for (int i = 0; i < s.Length; ++i)
{
char c = s[i];
bool[] b = DnaChar.CharToBits(c);
bits[i * 2] = b[0];
bits[i * 2 + 1] = b[1];
}
Content = new BitArray(bits);
}
