protected virtual void SpawnSpecies(ComplexConcentration complexConcentration)
{
int amount = Mathf.RoundToInt(complexConcentration.concentration * container.volume * 6.022141e23f);
if (amount < 1 || complexConcentration.moleculeCount < 1)
{
return;
}
MoleculeInitData initData = new MoleculeInitData(complexConcentration.complexPattern, CalculateMoleculeTransforms(complexConcentration.complexPattern),
GetRelevantBindReactions(complexConcentration.complexPattern),
GetRelevantCollisionFreeReactions(complexConcentration.complexPattern));
Complex complex;
for (int i = 0; i < amount; i++)
{
complex = new Complex(initData, this);
//add all the new molecules as initial agents
foreach (string moleculeName in complex.molecules.Keys)
{
foreach (Molecule molecule in complex.molecules[moleculeName])
{
molecule.agentID = nextID;
agents.Add(molecule.agentID, new AgentData(moleculeName, molecule.position, molecule.rotation));
molecules.Add(molecule.agentID, molecule);
}
}
}
}
public void SpawnMolecules(MoleculeInitData initData)
{
molecules = new Dictionary <string, List <Molecule> >();
foreach (string moleculeName in initData.complexPattern.moleculePatterns.Keys)
{
if (!molecules.ContainsKey(moleculeName))
{
molecules.Add(moleculeName, new List <Molecule>());
}
for (int i = 0; i < initData.complexPattern.moleculePatterns[moleculeName].Count; i++)
{
molecules[moleculeName].Add(new Molecule(initData.complexPattern.moleculePatterns[moleculeName][i], initData.moleculeTransforms[moleculeName][i], this));
}
}
ConnectBoundComponents();
InitReactions(initData.relevantBindReactions, initData.relevantCollisionFreeReactions);
}
public Complex(MoleculeInitData initData, Reactor _reactor)
{
reactor = _reactor;
SpawnMolecules(initData);
Init(reactor.container.GetRandomPointInBounds(0.1f), Random.rotation);
}