public void GetAllGuldmosslavParentsHierarchicalTest()
{
using (ShimsContext.Create())
{
//Arrange
const int GuldmosslavTaxonId = 228321;
LoginApplicationUserAndSetSessionVariables();
SetSwedishLanguage();
IUserContext userContext = ApplicationUserContextSV;
TaxonRelationSearchCriteria searchCriteria = new TaxonRelationSearchCriteria();
searchCriteria.Scope = TaxonRelationSearchScope.AllParentRelations;
searchCriteria.Taxa = new TaxonList {
CoreData.TaxonManager.GetTaxon(userContext, GuldmosslavTaxonId)
};
TaxonRelationList guldmosslavAllParentRelations = CoreData.TaxonManager.GetTaxonRelations(userContext, searchCriteria);
TaxonRelationsTree tree = TaxonRelationsTreeManager.CreateTaxonRelationsTree(userContext, guldmosslavAllParentRelations, searchCriteria.Taxa);
ITaxonRelationsTreeNode node = tree.GetTreeNode(GuldmosslavTaxonId);
//Act
List <ITaxonRelationsTreeEdge> parentEdges = node.GetAllValidParentEdgesTopToBottom(true);
//Assert
Assert.AreEqual(0, parentEdges.First().Parent.Taxon.Category.Id); // Assert first item is Biota
Assert.AreEqual(GuldmosslavTaxonId, parentEdges.Last().Child.Taxon.Id); // Assert last item is guldmosslav
// When getting guldmosslav taxonrelations a non valid parent relation is included.
// which should be removed when getting all parents hierarchical using the tree.
Assert.AreNotEqual(guldmosslavAllParentRelations.Count, parentEdges.Count);
}
}
public ITaxon GetTaxon(IUserContext userContext, int taxonId)
{
if (taxonId == DyntaxaTestSettings.Default.TestTaxonId)
{
return(GetReferenceTaxon(userContext, taxonId));
}
if (taxonId == DyntaxaTestSettings.Default.TestParentTaxonId)
{
ITaxon parentTaxon = GetReferenceParentTaxon(userContext, taxonId);
foreach (ITaxonRelation parent in parentTaxon.GetNearestParentTaxonRelations(userContext))
{
TaxonRelationList relations = new TaxonRelationList();
ITaxon grandParentTaxon = GetReferenceGrandParentTaxon(userContext, DyntaxaTestSettings.Default.TestParentTaxonId + 10);
ITaxonRelation rel = new TaxonRelation()
{
ParentTaxon = grandParentTaxon, ValidFromDate = DateTime.Now, ValidToDate = new DateTime(2022, 1, 30), IsMainRelation = true, ReplacedInTaxonRevisionEventId = null
};
relations.Add(rel);
parent.ChildTaxon = grandParentTaxon;
parent.ChildTaxon.SetParentTaxa(relations);
}
return(parentTaxon);
}
if (taxonId == DyntaxaTestSettings.Default.PsophusStridulusTaxonId)
{
return(GetReferenceTaxon(userContext, taxonId));
}
if (taxonId == DyntaxaTestSettings.Default.ParnassiusApolloId)
{
return(GetReferenceTaxon(userContext, taxonId));
}
return(null);
}
/// <summary>
/// Updates the cache by getting all relations and all taxa from Taxon service
/// and create a TaxonRelationTree.
/// This method is thread safe.
/// </summary>
/// <param name="userContext">The user context.</param>
public static void UpdateCache(IUserContext userContext)
{
lock (LockingTarget)
{
Debug.WriteLine("Start update Cache {0}", DateTime.Now);
ITaxonSearchCriteria taxonSearchCriteria = new TaxonSearchCriteria();
var allTaxa = CoreData.TaxonManager.GetTaxa(userContext, taxonSearchCriteria);
TaxonRelationSearchCriteria searchCriteria = new TaxonRelationSearchCriteria();
TaxonRelationList allRelations = CoreData.TaxonManager.GetTaxonRelations(userContext, searchCriteria);
TaxonRelationList = allRelations;
CachedTaxonRelationTree = TaxonRelationsTreeManager.CreateTaxonRelationsTree(
userContext,
allRelations,
allTaxa);
CacheLastUpdatedTime = DateTime.Now;
Debug.WriteLine("End update Cache {0}", DateTime.Now);
DyntaxaLogger.WriteMessage("DyntaxaTree updated {0}", DateTime.Now);
}
}
public void SplitGraphTest()
{
using (ShimsContext.Create())
{
//Arrange
LoginApplicationUserAndSetSessionVariables();
SetSwedishLanguage();
IUserContext userContext = ApplicationUserContextSV;
const int lumpSplitTaxonId = 2755;
//TaxonIdBefore: 233285
//TaxonIdAfter: 2755
ITaxonSearchCriteria taxonSearchCriteria = new TaxonSearchCriteria();
TaxonList allTaxa = CoreData.TaxonManager.GetTaxa(userContext, taxonSearchCriteria);
TaxonRelationSearchCriteria searchCriteria = new TaxonRelationSearchCriteria();
TaxonRelationList allRelations = CoreData.TaxonManager.GetTaxonRelations(userContext, searchCriteria);
TaxonRelationsTree tree = TaxonRelationsTreeManager.CreateTaxonRelationsTree(userContext, allRelations,
allTaxa, false);
var edges = tree.GetAllChildAndParentEdges(lumpSplitTaxonId);
var edges2 = tree.GetAllValidChildAndParentEdges(lumpSplitTaxonId);
List <ITaxonRelationsTreeNode> sourceNodes = new List <ITaxonRelationsTreeNode> {
tree.GetTreeNode(lumpSplitTaxonId)
};
GraphVizFormat graphVizFormat = new GraphVizFormat()
{
ShowLumpsAndSplits = true,
ShowRelationId = false
};
string graphRepresentation2 = GraphvizManager.CreateGraphvizFormatRepresentation(
userContext,
tree,
edges2,
sourceNodes,
graphVizFormat);
int x = 8;
}
}
public TaxonRelationList GetTaxonRelations(IUserContext userContext, ITaxonRelationSearchCriteria searchCriteria)
{
ITaxon parentTaxon = GetReferenceParentTaxon(userContext, 5398);
ITaxon taxon = new Taxon();
taxon.Id = 3897845;
taxon.SortOrder = 4;
taxon.Category = new TaxonCategory()
{
Id = 2
};
ITaxonRelation taxonRel = new TaxonRelation()
{
ParentTaxon = parentTaxon, ValidFromDate = DateTime.Now, ValidToDate = new DateTime(2022, 1, 30), IsMainRelation = true, ReplacedInTaxonRevisionEventId = null, ChildTaxon = taxon,
};
TaxonRelationList list = new TaxonRelationList();
list.Add(taxonRel);
return(list);
}
/// <summary>
/// Creates a taxon for test
/// </summary>
/// <returns></returns>
public ITaxon GetReferenceTaxon(IUserContext userContext, int taxonId)
{
ITaxon refTaxon = new Taxon();
string conceptDefinitionPartString = "ConceptDefinitionPartString Text";
DateTime createdDate = new DateTime(2004, 01, 20);
Int32 createdBy = userContext.User.Id;
string personName = @"Hölje Soderås";
DateTime validFromDate = new DateTime(1763, 02, 08);
DateTime validToDate = new DateTime(2447, 08, 01);
// refTaxon.ConceptDefinitionFullGeneratedString = conceptDefinitionFullGeneratedString;
refTaxon.PartOfConceptDefinition = conceptDefinitionPartString;
refTaxon.CreatedBy = createdBy;
refTaxon.CreatedDate = createdDate;
refTaxon.DataContext = new DataContext(userContext);
refTaxon.ModifiedByPerson = personName;
refTaxon.ValidFromDate = validFromDate;
refTaxon.ValidToDate = validToDate;
refTaxon.Id = taxonId;
int taxonNameId = DyntaxaTestSettings.Default.TestTaxonNameId;
//ITaxonName refTaxonName = GetReferenceTaxonName(userContext, taxonId, taxonNameId);
//ITaxonName refTaxonName2 = GetReferenceTaxonName(userContext, taxonId, taxonNameId +1);
//refTaxonName2.IsRecommended = false;
ITaxonCategory taxonCategory = GetReferenceTaxonCategory(userContext, 0);
ITaxonProperties taxonProperties = new TaxonProperties()
{
DataContext = new DataContext(userContext), IsValid = true, TaxonCategory = taxonCategory, ValidToDate = new DateTime(2111, 12, 31)
};
refTaxon.SetTaxonProperties(new List <ITaxonProperties>()
{
taxonProperties
});
refTaxon.Category = taxonCategory;
//ITaxonName recName = new TaxonName(userContext);
refTaxon.Author = "ReferenceAuthor"; //GetReferenceTaxonName(userContext, taxonId, taxonNameId).Author;
refTaxon.ScientificName = "ReferenceScentificName"; //GetReferenceTaxonName(userContext, taxonId, taxonNameId).Name;
refTaxon.CommonName = "ReferenceCommonName"; //GetReferenceTaxonName(userContext, taxonId, taxonNameId + 1).Name;
ITaxon parentTaxon = GetReferenceParentTaxon(userContext, DyntaxaTestSettings.Default.TestParentTaxonId);
//TaxonRelationList relationList = refTaxon.GetNearestParentTaxonRelations(userContext);
//ITaxonRelation taxonRel = new TaxonRelation() { ParentTaxon = parentTaxon, ValidFromDate = DateTime.Now, ValidToDate = new DateTime(2022, 1, 30), IsMainRelation = true, ReplacedInTaxonRevisionEventId = null };
//relationList.Add(taxonRel);
refTaxon.GetNearestParentTaxonRelations(userContext).Add(new TaxonRelation()
{
ParentTaxon = parentTaxon, ValidFromDate = DateTime.Now, ValidToDate = new DateTime(2022, 1, 30), IsMainRelation = true, ReplacedInTaxonRevisionEventId = null
});
ITaxon taxon = new Taxon();
taxon.Id = 3897845;
taxon.SortOrder = 4;
taxon.Category = new TaxonCategory()
{
Id = 2
};
TaxonRelationList parentsList = new TaxonRelationList();
parentsList.Add(new TaxonRelation()
{
ParentTaxon = parentTaxon, ValidFromDate = DateTime.Now, ValidToDate = new DateTime(2022, 1, 30), IsMainRelation = true, ReplacedInTaxonRevisionEventId = null, ChildTaxon = taxon
});
refTaxon.IsInRevision = true;
refTaxon.SetParentTaxa(parentsList);
return(refTaxon);
}
