public string GetRatioFile(Summary.IIdentifiedSpectrum mph)
{
string ratioFile = (string)mph.Annotations[O18QuantificationConstants.O18_RATIO_FILE];
if (ratioFile.Equals("-"))
{
return(null);
}
string result;
if (IsRelativeDir(ratioFile))
{
result = GetSummaryDirectory() + "/" + ratioFile;
}
else
{
result = GetDetailDirectory() + "/" + ratioFile;
}
result = new FileInfo(result).FullName;
if (!File.Exists(result))
{
return(null);
}
return(result);
}
private static void AddRatio(Summary.IIdentifiedSpectrum pep, Summary.IIdentifiedProteinGroup mutProtein, string name)
{
var qr = mutProtein[0].FindITraqQuantificationResult();
foreach (var q in qr.DatasetMap)
{
foreach (var p in q.Value.RatioMap)
{
pep.Annotations[name + q.Key + "_" + p.Key] = p.Value.RatioStr;
}
}
}
