public void TestClearFilters()
{
// init test data
var idFileReader = IdFileReaderFactory.CreateReader(idFile);
var ids = idFileReader.Read();
var idList = ids.ToList();
foreach (var id in idList)
{
id.LcMs = null;
id.RawFileName = Path.GetFileNameWithoutExtension(rawFile);
}
var prsms = idList;
// init scan vm
var scanVm = new ScanViewModel(new TestableMainDialogService(), prsms);
scanVm.ClearFilters();
// add filters
////scanVm.AddFilter("Sequence", "EAQ");
var sequenceFilter = scanVm.Filters.FirstOrDefault(x => x.Name == "Sequence") as MultiValueFilterViewModel;
Assert.NotNull(sequenceFilter);
sequenceFilter.Values.Add("EAQ");
/////scanVm.AddFilter("Protein", "YLR");
var proteinFilter =
scanVm.Filters.FirstOrDefault(x => x.Name == "Protein Name") as MultiValueFilterViewModel;
Assert.NotNull(proteinFilter);
sequenceFilter.Values.Add("YLR");
// Sanity check: there should be fewer PrSms than before
Assert.True(scanVm.FilteredData.Length < prsms.Count);
// Clear filters
scanVm.ClearFilters();
// All prsms should now be showing
Assert.True(scanVm.FilteredData.Length == prsms.Count);
}
public void TestHideUnidentifedScans()
{
// init test data
var idFileReader = IdFileReaderFactory.CreateReader(idFile);
var ids = idFileReader.Read();
var idList = ids.ToList();
var lcms = PbfLcMsRun.GetLcMsRun(rawFile);
foreach (var id in idList)
{
id.LcMs = lcms;
id.RawFileName = Path.GetFileNameWithoutExtension(rawFile);
}
var scans = lcms.GetScanNumbers(2);
foreach (var scan in scans)
{
idList.Add(new PrSm {
Scan = scan, LcMs = lcms, RawFileName = Path.GetFileNameWithoutExtension(rawFile), Score = double.NaN
});
}
var prsms = idList;
// init scan vm
var scanVm = new ScanViewModel(new TestableMainDialogService(), prsms);
scanVm.ClearFilters();
Assert.AreEqual(prsms.Count, scanVm.FilteredData.Length);
////scanVm.HideUnidentifiedScans = true;
Assert.True(prsms.Count > scanVm.FilteredData.Length);
}