public ReindexJobTask(
Func <IScoped <IFhirOperationDataStore> > fhirOperationDataStoreFactory,
Func <IScoped <IFhirDataStore> > fhirDataStoreFactory,
IOptions <ReindexJobConfiguration> reindexJobConfiguration,
Func <IScoped <ISearchService> > searchServiceFactory,
ISupportedSearchParameterDefinitionManager supportedSearchParameterDefinitionManager,
IReindexUtilities reindexUtilities,
IFhirRequestContextAccessor fhirRequestContextAccessor,
IReindexJobThrottleController throttleController,
IModelInfoProvider modelInfoProvider,
ILogger <ReindexJobTask> logger)
{
EnsureArg.IsNotNull(fhirOperationDataStoreFactory, nameof(fhirOperationDataStoreFactory));
EnsureArg.IsNotNull(fhirDataStoreFactory, nameof(fhirDataStoreFactory));
EnsureArg.IsNotNull(reindexJobConfiguration?.Value, nameof(reindexJobConfiguration));
EnsureArg.IsNotNull(searchServiceFactory, nameof(searchServiceFactory));
EnsureArg.IsNotNull(supportedSearchParameterDefinitionManager, nameof(supportedSearchParameterDefinitionManager));
EnsureArg.IsNotNull(reindexUtilities, nameof(reindexUtilities));
EnsureArg.IsNotNull(throttleController, nameof(throttleController));
EnsureArg.IsNotNull(modelInfoProvider, nameof(modelInfoProvider));
EnsureArg.IsNotNull(logger, nameof(logger));
_fhirOperationDataStoreFactory = fhirOperationDataStoreFactory;
_fhirDataStoreFactory = fhirDataStoreFactory;
_reindexJobConfiguration = reindexJobConfiguration.Value;
_searchServiceFactory = searchServiceFactory;
_supportedSearchParameterDefinitionManager = supportedSearchParameterDefinitionManager;
_reindexUtilities = reindexUtilities;
_contextAccessor = fhirRequestContextAccessor;
_throttleController = throttleController;
_modelInfoProvider = modelInfoProvider;
_logger = logger;
}
public ReindexJobWorkerBackgroundService(ReindexJobWorker reindexJobWorker, IOptions <ReindexJobConfiguration> reindexJobConfiguration)
{
EnsureArg.IsNotNull(reindexJobWorker, nameof(reindexJobWorker));
EnsureArg.IsNotNull(reindexJobConfiguration?.Value, nameof(reindexJobConfiguration));
_reindexJobWorker = reindexJobWorker;
_reindexJobConfiguration = reindexJobConfiguration.Value;
}
public async Task InitializeAsync()
{
_fhirOperationDataStore = _fixture.OperationDataStore;
_fhirStorageTestHelper = _fixture.TestHelper;
_scopedOperationDataStore = _fixture.OperationDataStore.CreateMockScope();
_scopedDataStore = _fixture.DataStore.CreateMockScope();
_searchParameterStatusDataStore = _fixture.SearchParameterStatusDataStore;
_jobConfiguration = new ReindexJobConfiguration();
IOptions <ReindexJobConfiguration> optionsReindexConfig = Substitute.For <IOptions <ReindexJobConfiguration> >();
optionsReindexConfig.Value.Returns(_jobConfiguration);
_searchParameterDefinitionManager = new SearchParameterDefinitionManager(ModelInfoProvider.Instance);
await _searchParameterDefinitionManager.StartAsync(CancellationToken.None);
_supportedSearchParameterDefinitionManager = new SupportedSearchParameterDefinitionManager(_searchParameterDefinitionManager);
var fhirRequestContextAccessor = Substitute.For <IFhirRequestContextAccessor>();
_searchableSearchParameterDefinitionManager = new SearchableSearchParameterDefinitionManager(_searchParameterDefinitionManager, fhirRequestContextAccessor);
ResourceWrapperFactory wrapperFactory = Mock.TypeWithArguments <ResourceWrapperFactory>(
new RawResourceFactory(new FhirJsonSerializer()),
_searchIndexer,
_searchableSearchParameterDefinitionManager,
Deserializers.ResourceDeserializer);
_searchParameterStatusManager = new SearchParameterStatusManager(
_searchParameterStatusDataStore,
_searchParameterDefinitionManager,
_searchParameterSupportResolver,
_mediator);
_createReindexRequestHandler = new CreateReindexRequestHandler(
_fhirOperationDataStore,
DisabledFhirAuthorizationService.Instance,
optionsReindexConfig,
_searchParameterDefinitionManager);
_reindexUtilities = new ReindexUtilities(
() => _scopedDataStore,
_searchIndexer,
Deserializers.ResourceDeserializer,
_supportedSearchParameterDefinitionManager,
_searchParameterStatusManager,
wrapperFactory);
coreOptions.Value.Returns(new CoreFeatureConfiguration());
var searchParameterExpressionParser = new SearchParameterExpressionParser(new ReferenceSearchValueParser(fhirRequestContextAccessor));
var expressionParser = new ExpressionParser(() => _searchableSearchParameterDefinitionManager, searchParameterExpressionParser);
var searchOptionsFactory = new SearchOptionsFactory(expressionParser, () => _searchableSearchParameterDefinitionManager, coreOptions, fhirRequestContextAccessor, _sortingValidator, NullLogger <SearchOptionsFactory> .Instance);
var cosmosSearchService = new FhirCosmosSearchService(searchOptionsFactory, _fixture.DataStore as CosmosFhirDataStore, new QueryBuilder(), _searchParameterDefinitionManager, fhirRequestContextAccessor) as ISearchService;
_searchService = cosmosSearchService.CreateMockScope();
await _fhirStorageTestHelper.DeleteAllReindexJobRecordsAsync(CancellationToken.None);
}
public ReindexJobWorker(Func <IScoped <IFhirOperationDataStore> > fhirOperationDataStoreFactory, IOptions <ReindexJobConfiguration> reindexJobConfiguration, Func <IReindexJobTask> reindexJobTaskFactory, ILogger <ReindexJobWorker> logger)
{
EnsureArg.IsNotNull(fhirOperationDataStoreFactory, nameof(fhirOperationDataStoreFactory));
EnsureArg.IsNotNull(reindexJobConfiguration?.Value, nameof(reindexJobConfiguration));
EnsureArg.IsNotNull(reindexJobTaskFactory, nameof(reindexJobTaskFactory));
EnsureArg.IsNotNull(logger, nameof(logger));
_fhirOperationDataStoreFactory = fhirOperationDataStoreFactory;
_reindexJobConfiguration = reindexJobConfiguration.Value;
_reindexJobTaskFactory = reindexJobTaskFactory;
_logger = logger;
}
public CreateReindexRequestHandler(
IFhirOperationDataStore fhirOperationDataStore,
IAuthorizationService <DataActions> authorizationService,
IOptions <ReindexJobConfiguration> reindexJobConfiguration,
ISearchParameterDefinitionManager searchParameterDefinitionManager)
{
EnsureArg.IsNotNull(fhirOperationDataStore, nameof(fhirOperationDataStore));
EnsureArg.IsNotNull(authorizationService, nameof(authorizationService));
EnsureArg.IsNotNull(reindexJobConfiguration, nameof(reindexJobConfiguration));
EnsureArg.IsNotNull(searchParameterDefinitionManager, nameof(searchParameterDefinitionManager));
_fhirOperationDataStore = fhirOperationDataStore;
_authorizationService = authorizationService;
_reindexJobConfiguration = reindexJobConfiguration.Value;
_searchParameterDefinitionManager = searchParameterDefinitionManager;
}
public ReindexController(
IMediator mediator,
IFhirRequestContextAccessor fhirRequestContextAccessor,
IOptions <OperationsConfiguration> operationsConfig,
ILogger <ReindexController> logger)
{
EnsureArg.IsNotNull(mediator, nameof(mediator));
EnsureArg.IsNotNull(fhirRequestContextAccessor, nameof(fhirRequestContextAccessor));
EnsureArg.IsNotNull(operationsConfig?.Value?.Reindex, nameof(operationsConfig));
EnsureArg.IsNotNull(logger, nameof(logger));
_mediator = mediator;
_fhirRequestContextAccessor = fhirRequestContextAccessor;
_config = operationsConfig.Value.Reindex;
_logger = logger;
}
public ReindexController(
IMediator mediator,
IOptions <OperationsConfiguration> operationsConfig,
IUrlResolver urlResolver,
ILogger <ReindexController> logger)
{
EnsureArg.IsNotNull(mediator, nameof(mediator));
EnsureArg.IsNotNull(operationsConfig?.Value?.Reindex, nameof(operationsConfig));
EnsureArg.IsNotNull(urlResolver, nameof(urlResolver));
EnsureArg.IsNotNull(logger, nameof(logger));
_mediator = mediator;
_config = operationsConfig.Value.Reindex;
_urlResolver = urlResolver;
_logger = logger;
}
public CreateReindexRequestHandler(
IClaimsExtractor claimsExtractor,
IFhirOperationDataStore fhirOperationDataStore,
IFhirAuthorizationService authorizationService,
IOptions <ReindexJobConfiguration> reindexJobConfiguration)
{
EnsureArg.IsNotNull(claimsExtractor, nameof(claimsExtractor));
EnsureArg.IsNotNull(fhirOperationDataStore, nameof(fhirOperationDataStore));
EnsureArg.IsNotNull(authorizationService, nameof(authorizationService));
EnsureArg.IsNotNull(reindexJobConfiguration, nameof(reindexJobConfiguration));
_claimsExtractor = claimsExtractor;
_fhirOperationDataStore = fhirOperationDataStore;
_authorizationService = authorizationService;
_reindexJobConfiguration = reindexJobConfiguration.Value;
}
public async Task InitializeAsync()
{
_fhirOperationDataStore = _fixture.OperationDataStore;
_fhirStorageTestHelper = _fixture.TestHelper;
_scopedOperationDataStore = _fhirOperationDataStore.CreateMockScope();
_scopedDataStore = _fixture.DataStore.CreateMockScope();
_jobConfiguration = new ReindexJobConfiguration();
IOptions <ReindexJobConfiguration> optionsReindexConfig = Substitute.For <IOptions <ReindexJobConfiguration> >();
optionsReindexConfig.Value.Returns(_jobConfiguration);
_searchParameterDefinitionManager = _fixture.SearchParameterDefinitionManager;
_supportedSearchParameterDefinitionManager = _fixture.SupportedSearchParameterDefinitionManager;
ResourceWrapperFactory wrapperFactory = Mock.TypeWithArguments <ResourceWrapperFactory>(
new RawResourceFactory(new FhirJsonSerializer()),
new FhirRequestContextAccessor(),
_searchIndexer,
_searchParameterDefinitionManager,
Deserializers.ResourceDeserializer);
_searchParameterStatusManager = _fixture.SearchParameterStatusManager;
_createReindexRequestHandler = new CreateReindexRequestHandler(
_fhirOperationDataStore,
DisabledFhirAuthorizationService.Instance,
optionsReindexConfig,
_searchParameterDefinitionManager,
_searchParameterOperations);
_reindexUtilities = new ReindexUtilities(
() => _scopedDataStore,
_searchIndexer,
Deserializers.ResourceDeserializer,
_supportedSearchParameterDefinitionManager,
_searchParameterStatusManager,
wrapperFactory);
_searchService = _fixture.SearchService.CreateMockScope();
await _fhirStorageTestHelper.DeleteAllReindexJobRecordsAsync(CancellationToken.None);
_throttleController.GetThrottleBasedDelay().Returns(0);
_throttleController.GetThrottleBatchSize().Returns(100U);
}
private ReindexController GetController(ReindexJobConfiguration reindexConfig)
{
var operationConfig = new OperationsConfiguration()
{
Reindex = reindexConfig,
};
IOptions <OperationsConfiguration> optionsOperationConfiguration = Substitute.For <IOptions <OperationsConfiguration> >();
optionsOperationConfiguration.Value.Returns(operationConfig);
return(new ReindexController(
_mediator,
optionsOperationConfiguration,
_urlResolver,
NullLogger <ReindexController> .Instance));
}
public ReindexJobTests(FhirStorageTestsFixture fixture)
{
_fhirOperationDataStore = fixture.OperationDataStore;
_fhirStorageTestHelper = fixture.TestHelper;
_scopedOperationDataStore = fixture.OperationDataStore.CreateMockScope();
_scopedOperationDataStore = fixture.OperationDataStore.CreateMockScope();
_scopedDataStore = fixture.DataStore.CreateMockScope();
_jobConfiguration = new ReindexJobConfiguration();
IOptions <ReindexJobConfiguration> optionsReindexConfig = Substitute.For <IOptions <ReindexJobConfiguration> >();
optionsReindexConfig.Value.Returns(_jobConfiguration);
_searchParameterDefinitionManager = new SearchParameterDefinitionManager(ModelInfoProvider.Instance);
_searchParameterDefinitionManager.Start();
_searchParameterDefinitionManager.UpdateSearchParameterHashMap(new Dictionary <string, string>()
{
{ "Patient", "newHash" }
});
_supportedSearchParameterDefinitionManager = new SupportedSearchParameterDefinitionManager(_searchParameterDefinitionManager);
var fhirRequestContextAccessor = Substitute.For <IFhirRequestContextAccessor>();
_searchableSearchParameterDefinitionManager = new SearchableSearchParameterDefinitionManager(_searchParameterDefinitionManager, fhirRequestContextAccessor);
_createReindexRequestHandler = new CreateReindexRequestHandler(
_fhirOperationDataStore,
DisabledFhirAuthorizationService.Instance,
optionsReindexConfig,
_searchParameterDefinitionManager);
_reindexUtilities = new ReindexUtilities(
() => _scopedDataStore,
_searchIndexer,
Deserializers.ResourceDeserializer,
_supportedSearchParameterDefinitionManager,
_searchParameterRegistry);
coreOptions.Value.Returns(new CoreFeatureConfiguration());
var searchParameterExpressionParser = new SearchParameterExpressionParser(() => _searchParameterDefinitionManager, new ReferenceSearchValueParser(fhirRequestContextAccessor));
var expressionParser = new ExpressionParser(() => _searchableSearchParameterDefinitionManager, searchParameterExpressionParser);
var searchOptionsFactory = new SearchOptionsFactory(expressionParser, () => _searchableSearchParameterDefinitionManager, coreOptions, fhirRequestContextAccessor, NullLogger <SearchOptionsFactory> .Instance);
var cosmosSearchService = new FhirCosmosSearchService(searchOptionsFactory, fixture.DataStore as CosmosFhirDataStore, new QueryBuilder()) as ISearchService;
_searchService = cosmosSearchService.CreateMockScope();
}
public ReindexJobTask(
Func <IScoped <IFhirOperationDataStore> > fhirOperationDataStoreFactory,
IOptions <ReindexJobConfiguration> reindexJobConfiguration,
Func <IScoped <ISearchService> > searchServiceFactory,
ISupportedSearchParameterDefinitionManager supportedSearchParameterDefinitionManager,
ILogger <ReindexJobTask> logger)
{
EnsureArg.IsNotNull(fhirOperationDataStoreFactory, nameof(fhirOperationDataStoreFactory));
EnsureArg.IsNotNull(reindexJobConfiguration?.Value, nameof(reindexJobConfiguration));
EnsureArg.IsNotNull(searchServiceFactory, nameof(searchServiceFactory));
EnsureArg.IsNotNull(supportedSearchParameterDefinitionManager, nameof(supportedSearchParameterDefinitionManager));
EnsureArg.IsNotNull(logger, nameof(logger));
_fhirOperationDataStoreFactory = fhirOperationDataStoreFactory;
_reindexJobConfiguration = reindexJobConfiguration.Value;
_searchServiceFactory = searchServiceFactory;
_supportedSearchParameterDefinitionManager = supportedSearchParameterDefinitionManager;
_logger = logger;
}
