private static ReferencePloidy LoadReferencePloidy(IEnumerable <ReferencePloidyInterval> ploidyVcfIntervals,
bool useSymbolicAltAlleleInPloidyVcf = true)
{
var sampleId = new SampleId("sampleId");
var vcf = GetVcfAsString(sampleId, ploidyVcfIntervals, useSymbolicAltAlleleInPloidyVcf);
using (var textReader = new StringReader(vcf))
using (var reader = new GzipOrTextReader(textReader))
using (var vcfReader = new VcfReader(reader))
{
return(ReferencePloidy.Load(vcfReader, sampleId));
}
}
