public Leave_out_readWriteOptions_class()
{
string directory = Global_directory_and_file_class.MBCO_datasets_directory;
ReadWriteClass.Create_directory_if_it_does_not_exist(directory);
File = directory + "Supplementary Table S35 - inferred SCP relationships.txt";
Key_propertyNames = new string[] { "ProcessLevel", "Left_out_processName", "ProcessID", "ProcessName", "Original_process_size", "Process_size_after_left_out", "New_symbols_count", "New_symbols_count_divided_by_original_process_size", "New_symbols_rank_increase", "New_symbols_rank_increase_divided_by_original_process_size" };
Key_columnNames = Key_propertyNames;
File_has_headline = true;
HeadlineDelimiters = new char[] { Global_class.Tab };
LineDelimiters = new char[] { Global_class.Tab };
Report = ReadWrite_report_enum.Report_main;
}
public Ontology_enrich_readWriteOptions_class(string subdirectory, string fileName)
{
string directory = Global_directory_and_file_class.Results_directory + subdirectory;
ReadWriteClass.Create_directory_if_it_does_not_exist(directory);
this.File = directory + fileName;
Key_propertyNames = new string[] { "Ontology_type", "ProcessLevel", "EntryType", "Timepoint", "Sample_name", "Scp_id", "Scp_name", "Minus_log10_pvalue", "Pvalue", "FDR", "ReadWrite_overlap_symbols" };
Key_columnNames = new string[] { "Ontology_type", "ProcessLevel", "EntryType", "Timepoint", "Sample_name", "Scp_id", "Scp_name", "Minus_log10_pvalue", "Pvalue", "FDR", "Overlap_symbols" };
Key_columnNames = Key_propertyNames;
File_has_headline = true;
LineDelimiters = new char[] { Global_class.Tab };
HeadlineDelimiters = new char[] { Global_class.Tab };
Report = ReadWrite_report_enum.Report_main;
}
public void Generate_by_reading_files()
{
string directory = Global_directory_class.Degs_directory;
string[] complete_file_names = System.IO.Directory.GetFiles(directory);
string complete_file_name;
string fileName_without_extension;
int complete_file_names_length = complete_file_names.Length;
Deg_line_class[] add_degs;
for (int indexC = 0; indexC < complete_file_names_length; indexC++)
{
complete_file_name = complete_file_names[indexC];
fileName_without_extension = System.IO.Path.GetFileNameWithoutExtension(complete_file_name);
Deg_readOptions_class readOptions = new Deg_readOptions_class(complete_file_name);
add_degs = ReadWriteClass.ReadRawData_and_FillArray <Deg_line_class>(readOptions);
add_degs = Add_fileName(add_degs, fileName_without_extension);
Add_to_array(add_degs);
}
}
public async Task TwoWay_should_update_from_js_readwrite_property()
{
var datacontext = new ReadWriteClass();
var test = new TestInContextAsync()
{
Bind = (win) => Bind(win, datacontext, JavascriptBindingMode.TwoWay),
Test = async(mb) =>
{
var js = mb.JSRootObject;
var newValue = 1200;
var jsValue = _WebView.Factory.CreateInt(newValue);
SetAttribute(js, "ReadWrite", jsValue);
await Task.Delay(150);
DoSafeUI(() => datacontext.ReadWrite.Should().Be(newValue));
}
};
await RunAsync(test);
}
public async Task TwoWay_should_update_from_csharp_readwrite_property()
{
var datacontext = new ReadWriteClass();
var test = new TestInContextAsync()
{
Bind = (win) => Bind(win, datacontext, JavascriptBindingMode.TwoWay),
Test = async(mb) =>
{
var js = mb.JSRootObject;
var newValue = 550;
DoSafeUI(() => datacontext.ReadWrite = newValue);
await Task.Delay(150);
var readOnlyValue = GetIntAttribute(js, "ReadWrite");
readOnlyValue.Should().Be(newValue);
}
};
await RunAsync(test);
}
private void Read_mbco_associations()
{
MBCO_association_readOptions_class readOptions = new MBCO_association_readOptions_class();
this.MBCO_associations = ReadWriteClass.ReadRawData_and_FillArray <MBCO_association_line_class>(readOptions);
}
public void Write_in_results_directory(string fileName)
{
Ontology_enrichment_readWriteOptions_class readWriteOptions = new Ontology_enrichment_readWriteOptions_class(fileName);
ReadWriteClass.WriteData(this.Onto_enrich, readWriteOptions);
}
private void Read(Custom_data_readWriteOptions_class readWriteOptions)
{
this.Custom_data = ReadWriteClass.ReadRawData_and_FillArray <Custom_data_line_class>(readWriteOptions);
}
public void Write(string subdirectory, string file_name)
{
Ontology_enrich_readWriteOptions_class readWriteOptions = new Ontology_enrich_readWriteOptions_class(subdirectory, file_name);
ReadWriteClass.WriteData(Enrich, readWriteOptions);
}
private void Read()
{
Leave_out_readWriteOptions_class readWriteOptions = new Leave_out_readWriteOptions_class();
this.Leave_out_lines = ReadWriteClass.ReadRawData_and_FillArray <Leave_out_line_class>(readWriteOptions);
}
