public IsobaricResultMultipleFileDistillerUI()
{
InitializeComponent();
rawFiles.FileArgument = new OpenFileArgument("Raw Files", rawExtentions);
RcpaMultipleFileComponent adaptor = new RcpaMultipleFileComponent(rawFiles.GetItemInfos(), "RawFiles", "Raw File", false, true);
AddComponent(adaptor);
minPeakCount = new RcpaIntegerField(txtMinPeakCount, "MinPeakCount", "Minmum peak count", 4, true);
AddComponent(minPeakCount);
plexTypes = new RcpaComboBox <IsobaricType>(cbPlexType, "PlexType", IsobaricTypeFactory.IsobaricTypes, 0);
AddComponent(plexTypes);
readers = new RcpaComboBox <IIsobaricRawReader>(cbScanMode, "ScanMode", new IIsobaricRawReader[] { new IsobaricRawHCDMS2Reader(), new IsobaricRawHCDMS3Reader(), new IsobaricRawHCDParallelMS3Reader(), new IsobaricRawPQDCIDReader(), new IsobaricRawPQDReader() }, 0);
AddComponent(readers);
precursorPPMTolerance = new RcpaDoubleField(txtPrecursorPPMTolerance, "precursorPPMTolerance", "Precursor Tolerance (ppm)", 10, true);
AddComponent(precursorPPMTolerance);
productPPMTolerance = new RcpaDoubleField(txtProductPPM, "productPPMTolerance", "Product Ion Tolerance (ppm)", 10, true);
AddComponent(productPPMTolerance);
this.Text = Constants.GetSQHTitle(title, version);
}
public MaxQuantToMgfProcessorUI()
{
InitializeComponent();
this.Text = Constants.GetSQHTitle(title, version);
this.rawFiles.FileArgument = new OpenFileArgument("MaxQuant APL", ".apl");
this.rawFileComp = new RcpaMultipleFileComponent(this.rawFiles.GetItemInfos(), "AplFiles", "MaxQuant APL", false, true);
this.AddComponent(rawFileComp);
this.mergeFile = new RcpaCheckBox(cbMerge, "MergeFile", false);
AddComponent(this.mergeFile);
}
public ITraqResultMultipleFileDistillerUI()
{
InitializeComponent();
rawFiles.FileArgument = new OpenFileArgument("Raw Files", rawExtentions);
RcpaMultipleFileComponent adaptor = new RcpaMultipleFileComponent(rawFiles.GetItemInfos(), "RawFiles", "Raw File", false, true);
AddComponent(adaptor);
individual = new RcpaCheckBox(cbIndividual, "Individual", false);
AddComponent(individual);
minPeakCount = new RcpaIntegerField(txtMinPeakCount, "MinPeakCount", "Minmum peak count", 4, true);
AddComponent(minPeakCount);
plexFiles = new string[] {
new FileInfo(Application.ExecutablePath).Directory.FullName + "\\itraq-4plex.csv",
new FileInfo(Application.ExecutablePath).Directory.FullName + "\\itraq-8plex.csv",
new FileInfo(Application.ExecutablePath).Directory.FullName + "\\tmt-6plex.csv"
};
plexTypes = new RcpaComboBox <IsobaricType>(cbPlexType, "PlexType", EnumUtils.EnumToArray <IsobaricType>(), 0);
AddComponent(plexTypes);
txtIsotopeFileName.Items.AddRange(plexFiles);
isotopeFile = new RcpaFileField2 <ComboBox>(btnIsotopeFile, txtIsotopeFileName, "IsotopeFile", new OpenFileArgument("Isotope Impurity Correction Table", "csv"), plexFiles[0], true, m => m.Text, (m, value) => m.Text = value);
AddComponent(isotopeFile);
readers = new RcpaComboBox <IITraqRawReader>(cbScanMode, "ScanMode", new IITraqRawReader[] { new ITraqRawHCDMS2Reader(), new ITraqRawHCDMS3Reader(), new ITraqRawHCDParallelMS3Reader(), new ITraqRawPQDCIDReader(), new ITraqRawPQDReader() }, 0);
AddComponent(readers);
normalizationBuilders = new RcpaComboBox <IITraqNormalizationBuilder>(cbNormalizationType, "NormalizationType",
new IITraqNormalizationBuilder[] { new ITraqNormalizationByMedianIntensityBuilder(), new ITraqNormalizationByTotalIntensityBuilder(), new ITraqNormalizationNoneBuilder() }, 1);
AddComponent(normalizationBuilders);
normalizationByIonInjectionTime = new RcpaCheckBox(cbNormalizeByIonInjectionTime, "normalizationByIonInjectionTime", false);
AddComponent(normalizationByIonInjectionTime);
precursorPPMTolerance = new RcpaDoubleField(txtPrecursorPPMTolerance, "precursorPPMTolerance", "Precursor Tolerance (ppm)", 10, true);
AddComponent(precursorPPMTolerance);
this.Text = Constants.GetSQHTitle(title, version);
}
public One2AllProcessorUI()
{
InitializeComponent();
this.SetFileArgument("Peptides", new OpenFileArgument("BuildSummary Peptides", "peptides"));
lbDtaFiles.FileArgument = new OpenFileArgument("Sequest Dtas", "dtas");
this.dtasFiles = new RcpaMultipleFileComponent(lbDtaFiles.GetItemInfos(), "DtasFiles", "Sequest Dtas File", false, true);
this.AddComponent(this.dtasFiles);
this.targetDir = new RcpaDirectoryField(btnTargetDirectory, txtTargetDirectory, "TargetDirectory", "Target Directory", true);
this.AddComponent(this.targetDir);
this.extractToSameDirectory = new RcpaCheckBox(cbExtractToSameDirectory, "ExtractToSameDirectory", false);
this.AddComponent(this.extractToSameDirectory);
this.Text = Constants.GetSQHTitle(title, version);
}
