public static void CueGui(CUE cue)
{
EditorGUILayout.LabelField("ID", cue.ID.ToString());
GUILayout.Label("Molecule Species", EditorStyles.boldLabel);
listViewMolecules.Gui(cue.Species);
Space();
GUILayout.Label("Add Molecule", EditorStyles.miniLabel);
/*GUILayout.BeginHorizontal ();
* if (GUILayout.Button ("From Selection")) {
*
* MoleculeCreator creator = new MoleculeCreator();
* creator.gameObjects = Selection.gameObjects;
* MoleculeSpecies species = creator.Create();
*
* listViewMolecules.FoldOpen(species);
* }
* GUILayout.EndHorizontal ();*/
GUILayout.BeginHorizontal();
if (GUILayout.Button("From PDB File"))
{
PdbImport pdbImport = new PdbImport();
pdbImport.UserSelectFile();
}
if (GUILayout.Button("Download From PDB"))
{
PdbImportWindow.UserDownload();
}
GUILayout.EndHorizontal();
Space();
GUILayout.Label("Reactions", EditorStyles.boldLabel);
listViewReactions.Gui(cue.ReactionTypes);
Space();
GUILayout.Label("Add Reaction", EditorStyles.miniLabel);
if (GUILayout.Button("Add Reaction"))
{
var item = cue.CreateReactionType();
cue.AddReaction(item);
EditorUtility.SetDirty(cue);
listViewReactions.FoldOpen(item);
}
Space();
GUILayout.Label("Placing", EditorStyles.boldLabel);
GUILayout.BeginHorizontal();
dispenser.Radius = EditorGUILayout.FloatField("Radius [nm]:", dispenser.Radius);
if (GUILayout.Button("f.Sim", GUILayout.MaxWidth(50)))
{
dispenser.Radius = Utils.GetSphereRadius(cue.Volume);
}
GUILayout.EndHorizontal();
if (GUILayout.Button("Remove all Molecules"))
{
cue.RemoveMolecules();
}
if (GUILayout.Button("Place Molecules"))
{
foreach (var species in cue.Species)
{
dispenser.AddMolecules(species, species.InitialQuantity);
}
dispenser.Place();
}
Space();
GUILayout.Label("Simulation", EditorStyles.boldLabel);
cue.Volume = Mathf.Max(0, EditorGUILayout.FloatField("Volume [nl]:", (float)cue.Volume));
/*bool volumeGizom = EditorGUILayout.Toggle ("Volume Visible:", cue.ScriptManager.HasScript<CellUnity.View.VolumeGizmo> ());
* if (volumeGizom)
* { cue.ScriptManager.GetOrAddScript<CellUnity.View.VolumeGizmo>(); }
* else
* { cue.ScriptManager.RemoveScript<CellUnity.View.VolumeGizmo>(); }
*/
EditorGUILayout.LabelField("Radius [nm]", Utils.GetSphereRadius(cue.Volume).ToString());
cue.SimulationStep = Mathf.Max(0, EditorGUILayout.FloatField("Simulation Step [s]:", (float)cue.SimulationStep));
cue.VisualizationStep = Mathf.Max(0, EditorGUILayout.FloatField("Visualization Step [s]:", (float)cue.VisualizationStep));
GUILayout.BeginHorizontal();
if (GUILayout.Button("Reload", GUILayout.MaxWidth(80)))
{
cue.SimulationManager.Reload();
}
SimulationState simulationState = cue.SimulationManager.State;
int oldSimulatorSelection;
if (simulationState == SimulationState.Running)
{
oldSimulatorSelection = 0;
}
else if (simulationState == SimulationState.Paused)
{
oldSimulatorSelection = 1;
}
else if (simulationState == SimulationState.Stopped)
{
oldSimulatorSelection = 2;
}
else
{
oldSimulatorSelection = -1;
}
int simulaorSelection =
GUILayout.SelectionGrid(oldSimulatorSelection, new string[] { "Start", "Pause", "Stop" }, 3);
if (simulaorSelection != oldSimulatorSelection)
{
if (simulaorSelection == 0)
{
cue.SimulationManager.Start();
}
else if (simulaorSelection == 1)
{
cue.SimulationManager.Pause();
}
else if (simulaorSelection == 2)
{
cue.SimulationManager.Stop();
}
}
GUILayout.EndHorizontal();
Space();
GUILayout.Label("Export", EditorStyles.boldLabel);
if (GUILayout.Button("Export SBML..."))
{
string filename = EditorUtility.SaveFilePanel("Export SBML", "", "model.xml", "xml");
new CellUnity.Export.SbmlExportCopasi(cue).Export(filename);
}
Space();
GUILayout.Label("Debug", EditorStyles.boldLabel);
if (GUILayout.Button("Auto Run Reactions"))
{
GameObject autoRun = new GameObject("AutoRun");
autoRun.AddComponent <AutoReaction>();
}
if (GUILayout.Button("Save Assets"))
{
AssetDatabase.SaveAssets();
}
Space();
//if (GUILayout.Button ("Reset")) {
// cue.ResetData();
//}
}
public static void UserDownload()
{
PdbImportWindow window = (PdbImportWindow)EditorWindow.GetWindow <PdbImportWindow>();
window.pdbImport = new PdbImport();
}
