Ejemplo n.º 1
0
        public void DecomposeStructure()
        {
            if (Pairs.Count() <= 0)
            {
                return;
            }
            //We initialize the interface to the alden parser.
            ManagedRNA structureparser = new ManagedRNA(Pairs, SequenceLength);
            XElement   extents         = structureparser.ComputeTieredAsXML();

            //We use LINQ queries to build up the extents.
            HandleHelices(extents);
            HandleHairpins(extents);
            HandleInternals(extents);
            HandleBulges(extents);
            HandleMultistems(extents);
            HandleStrands(extents);
            HandleTails(extents);
        }