private EndpointDescriptor GetEndpointDescriptor(OutcomeMeasure outcome)
{
StringBuilder sb = new StringBuilder(outcome.Name.ToLower());
sb.Replace("diagnosis of a", "");
sb.Replace("diangosis of", "");
sb.Replace("diagnosis of the", "");
string cleanedOutcomeName = Regex.Replace(sb.ToString(), @" ?\(.*?\)", string.Empty);
string[] forbiddenWordArr = new string[] { "during", "within" };
foreach (string forbiddenWord in forbiddenWordArr)
{
int redundantIndex = cleanedOutcomeName.IndexOf(forbiddenWord);
if (redundantIndex > 0)
{
cleanedOutcomeName = cleanedOutcomeName.Substring(0, redundantIndex);
}
}
cleanedOutcomeName = cleanedOutcomeName.Trim();
var result = endpointDescriptorList.FirstOrDefault(item => item.NameEN.ToLower() == outcome.Name.ToLower() || item.ChildList.Any(child => child.NameEN.ToLower() == outcome.Name.ToLower()));
return(null);
}
private void ParseOutocmesModule(ref Study result)
{
XmlNode outcomesModule = doc.SelectSingleNode("/FullStudiesResponse/FullStudyList/FullStudy/Struct/Struct[@Name='ProtocolSection']/Struct[@Name='OutcomesModule']");
if (outcomesModule == null)
{
return;
}
XmlNodeList outcomeList = outcomesModule.SelectNodes("./List[@Name='PrimaryOutcomeList']/Struct");
foreach (XmlNode outcome in outcomeList)
{
OutcomeMeasure newEndpoint = new OutcomeMeasure();
newEndpoint.EndpointPriority = OutcomePriorityType.PRIMARY;
newEndpoint.Description = ParseSingleNode(outcome, "./Field[@Name='PrimaryOutcomeDescription']");
newEndpoint.TimeFrame = ParseSingleNode(outcome, "./Field[@Name='PrimaryOutcomeTimeFrame']");
newEndpoint.Name = ParseSingleNode(outcome, "./Field[@Name='PrimaryOutcomeMeasure']");
newEndpoint.Study = result;
newEndpoint.EndpointDescriptor = GetEndpointDescriptor(newEndpoint);
result.EndpointList.Add(newEndpoint);
}
outcomeList = outcomesModule.SelectNodes("./List[@Name='SecondaryOutcomeList']/Struct");
foreach (XmlNode outcome in outcomeList)
{
OutcomeMeasure newEndpoint = new OutcomeMeasure();
newEndpoint.EndpointPriority = OutcomePriorityType.SECONDARY;
newEndpoint.Description = ParseSingleNode(outcome, "./Field[@Name='SecondaryOutcomeDescription']");
newEndpoint.TimeFrame = ParseSingleNode(outcome, "./Field[@Name='SecondaryOutcomeTimeFrame']");
newEndpoint.Name = ParseSingleNode(outcome, "./Field[@Name='SecondaryOutcomeMeasure']");
newEndpoint.Study = result;
newEndpoint.EndpointDescriptor = GetEndpointDescriptor(newEndpoint);
result.EndpointList.Add(newEndpoint);
}
}
public static Study Translate(Study study)
{
Study result = new Study();
result.Id = study.Id;
result.ActualPrimaryCompletionDate = study.ActualPrimaryCompletionDate;
result.ActualStudyStartDate = study.ActualStudyStartDate;
result.ConditionList = new List <Condition>();
foreach (Condition condition in study.ConditionList)
{
Condition newCondition = new Condition(Translator.Translate(condition.Name));
//newCondition.Icd10Item = condition.Icd10Item;
newCondition.Id = condition.Id;
result.ConditionList.Add(newCondition);
}
result.Design = new StudyDesign();
result.Design.FollowUpDuration = Translator.Translate(study.Design.FollowUpDuration);
result.Design.MaskingDescription = Translator.Translate(study.Design.MaskingDescription);
result.Design.ModelDescription = Translator.Translate(study.Design.ModelDescription);
result.Design.InterventionModel = study.Design.InterventionModel;
result.Design.ObservationalModel = study.Design.ObservationalModel;
result.Design.TimePerspective = study.Design.TimePerspective;
result.Design.EligibilityText = Translator.Translate(study.Design.EligibilityText);
result.EndpointList = new List <OutcomeMeasure>();
foreach (OutcomeMeasure measure in study.EndpointList)
{
OutcomeMeasure newMeasure = new OutcomeMeasure();
newMeasure.Description = Translator.Translate(measure.Description);
newMeasure.EndpointPriority = measure.EndpointPriority;
newMeasure.EndpointDescriptor = measure.EndpointDescriptor;
newMeasure.Id = measure.Id;
newMeasure.Name = Translator.Translate(measure.Name);
newMeasure.TimeFrame = Translator.Translate(measure.TimeFrame);
result.EndpointList.Add(newMeasure);
}
result.FirstResultsSubmittedDate = study.FirstResultsSubmittedDate;
result.FirstSubmittedDate = study.FirstResultsSubmittedDate;
result.FullTitle = Translator.Translate(study.FullTitle);
result.KeywordList = new List <string>();
foreach (string keyWord in study.KeywordList)
{
result.KeywordList.Add(Translator.Translate(keyWord));
}
result.LastUpdatePostedDate = study.LastUpdatePostedDate;
result.NctId = study.NctId;
result.PublicationList = study.PublicationList;
result.SecondaryIndentifierList = study.SecondaryIndentifierList;
result.ShortTitle = Translator.Translate(study.ShortTitle);
result.StudyArmList = new List <StudyArm>();
foreach (StudyArm arm in study.StudyArmList)
{
StudyArm newArm = new StudyArm();
newArm.Id = arm.Id;
newArm.Description = Translator.Translate(arm.Description);
newArm.InterventionDescription = Translator.Translate(arm.InterventionDescription);
newArm.InterventionName = Translator.Translate(arm.InterventionName);
newArm.Title = Translator.Translate(arm.Title);
newArm.InterventionType = arm.InterventionType;
newArm.Type = arm.Type;
newArm.InterventionList = new List <Intervention>();
foreach (Intervention intervention in arm.InterventionList)
{
Intervention newIntervention = new Intervention();
newIntervention.Id = intervention.Id;
newIntervention.Description = Translator.Translate(intervention.Description);
newIntervention.Name = Translator.Translate(intervention.Name);
newIntervention.OtherNameList = intervention.OtherNameList;
newIntervention.Type = intervention.Type;
newIntervention.StudyArmNameList = intervention.StudyArmNameList;
newArm.InterventionList.Add(newIntervention);
}
result.StudyArmList.Add(newArm);
}
result.OriginalLanguageStudy = study;
return(result);
}
