protected override Core.Results.TargetedResult ConvertTextToDataObject(List <string> processedData)
{
O16O18TargetedResult result = new O16O18TargetedResult();
result.DatasetName = LookupData(processedData, datasetHeaders);
if (result.DatasetName == "-1")
{
result.DatasetName = TryGetDatasetNameFromFileName();
}
result.ChargeState = ParseIntField(LookupData(processedData, chargeStateHeaders));
result.FitScore = ParseFloatField(LookupData(processedData, fitScoreHeaders));
result.Intensity = ParseFloatField(LookupData(processedData, intensityRepHeaders));
result.IntensityI0 = ParseFloatField(LookupData(processedData, intensityI0Headers));
result.IScore = ParseFloatField(LookupData(processedData, iscoreHeaders));
result.MassTagID = ParseLongField(LookupData(processedData, targetIDHeaders));
result.MonoMass = ParseDoubleField(LookupData(processedData, monomassHeaders));
result.MonoMZ = ParseDoubleField(LookupData(processedData, mzHeaders));
result.NET = ParseFloatField(LookupData(processedData, netHeaders));
result.NumChromPeaksWithinTol = ParseIntField(LookupData(processedData, numchromPeaksWithinTolHeaders));
result.ScanLC = ParseIntField(LookupData(processedData, scanHeaders));
result.ScanLCEnd = ParseIntField(LookupData(processedData, scanEndHeaders));
result.ScanLCStart = ParseIntField(LookupData(processedData, scanStartHeaders));
result.IntensityI2 = ParseFloatField(LookupData(processedData, intensityI2Headers));
result.IntensityI4 = ParseFloatField(LookupData(processedData, intensityI4Headers));
result.IntensityTheorI0 = ParseFloatField(LookupData(processedData, intensityTheorIOHeaders));
result.IntensityTheorI2 = ParseFloatField(LookupData(processedData, intensityTheorI2Headers));
result.IntensityTheorI4 = ParseFloatField(LookupData(processedData, intensityTheorI4Headers));
result.IntensityI4Adjusted = ParseFloatField(LookupData(processedData, intensityI4AdjustedHeaders));
return(result);
}
protected override string addAdditionalInfo(Core.Results.TargetedResult result)
{
O16O18TargetedResult o16o18result = (O16O18TargetedResult)result;
var data = new List <string>
{
o16o18result.IntensityI0,
o16o18result.IntensityI2,
o16o18result.IntensityI4,
o16o18result.IntensityI4Adjusted,
o16o18result.Ratio.ToString("0.0000")
};
return(string.Join(Delimiter.ToString(), data));
}
protected override string addAdditionalInfo(Core.Results.TargetedResult result)
{
O16O18TargetedResult o16o18result = (O16O18TargetedResult)result;
StringBuilder sb = new StringBuilder();
sb.Append(Delimiter);
sb.Append(o16o18result.IntensityI0);
sb.Append(Delimiter);
sb.Append(o16o18result.IntensityI2);
sb.Append(Delimiter);
sb.Append(o16o18result.IntensityI4);
sb.Append(Delimiter);
sb.Append(o16o18result.IntensityI4Adjusted);
sb.Append(Delimiter);
sb.Append(o16o18result.Ratio.ToString("0.0000"));
return(sb.ToString());
}
