public NucleotideCouple buildHalfCoupleChainFromOneSingle(Nucleotide chain)
{
if (chain.isPaired)
{
return(null);
}
chain = getHeadOfSingleChain(chain);
Nucleotide nhead = chain;
NucleotideCouple n = (Instantiate(couplePrefab) as GameObject).GetComponent <NucleotideCouple>();
NucleotideCouple head = n;
n.setLeftColor(chain.getColor());
n.setType(chain.type, Nucleotide.Type.Empty);
n.needHelix = false;
while (chain.next)
{
chain = chain.next;
n.next = (Instantiate(couplePrefab) as GameObject).GetComponent <NucleotideCouple>();
n.next.setLeftColor(chain.getColor());
n.next.setType(chain.type, Nucleotide.Type.Empty);
n.next.prev = n;
n.next.needHelix = false;
n.next.transform.rotation = nhead.transform.rotation;
n = n.next;
}
head.transform.rotation = nhead.transform.rotation;
head.transform.position = nhead.transform.position;
head.broadcastUpdateTransform();
destroySingleChain(chain);
return(head);
}
public IEnumerator fillHalfCoupleChainRoutine(NucleotideCouple head, float timeGap = 0.1F)
{
while (head)
{
head.setType(head.nucleotide1.type, getPairType(head.nucleotide1.type));
head.setRightColor(Color.white);
head.needHelix = true;
head = head.next;
yield return(new WaitForSeconds(timeGap));
}
}
public NucleotideCouple buildCoupleChainFromTwoSingles(Nucleotide c1, Nucleotide c2, Vector3 position = default(Vector3))
{
if (c1.isPaired || c2.isPaired)
{
return(null);
}
if (getLengthOfSingleChain(c1) != getLengthOfSingleChain(c2))
{
return(null);
}
c1 = getHeadOfSingleChain(c1);
if (c1 == getHeadOfSingleChain(c2))
{
return(null);
}
c2 = getTailOfSingleChain(c2);
NucleotideCouple n = (Instantiate(couplePrefab) as GameObject).GetComponent <NucleotideCouple>();
NucleotideCouple head = n;
n.setLeftColor(c1.getColor());
n.setRightColor(c2.getColor());
n.setType(c1.type, c2.type);
while (c1.next)
{
c1 = c1.next;
c2 = c2.prev;
n.next = (Instantiate(couplePrefab) as GameObject).GetComponent <NucleotideCouple>();
n.next.setLeftColor(c1.getColor());
n.next.setRightColor(c2.getColor());
n.next.setType(c1.type, c2.type);
n.next.prev = n;
n = n.next;
}
head.transform.position = position;
head.broadcastUpdateTransform();
destroySingleChain(c1);
destroySingleChain(c2);
return(n);
}
public NucleotideCouple String2CoupleChain(string s, Vector3 position = default(Vector3))
{
if (s[0] != '2')
{
return(null);
}
NucleotideCouple n = (Instantiate(couplePrefab) as GameObject).GetComponent <NucleotideCouple>();
NucleotideCouple head = n;
n.setType(Char2Type(s[1]), Char2Type(s[2]));
for (int i = 3; i < s.Length; i += 2)
{
n.next = (Instantiate(couplePrefab) as GameObject).GetComponent <NucleotideCouple>();
n.next.setType(Char2Type(s[i]), Char2Type(s[i + 1]));
n.next.prev = n;
n = n.next;
}
head.transform.position = position;
head.broadcastUpdateTransform();
return(n);
}
