public void ImporterTest2_newerFormat()
{
var importedResultFile =
@"\\protoapps\UserData\Slysz\Data\N14N15\2012_07_09_VelosOrbi Ponly datasets\Results\RSPH_Ponly_15_A_8May12_Earth_12-03-11_results.txt";
var importer = new N14N15TargetedResultFromTextImporter(importedResultFile);
var repo = importer.Import();
Assert.IsNotNull(repo);
Assert.IsTrue(repo.Results.Count > 0);
var testResult1 = (N14N15TargetedResultDTO)repo.Results[1];
Console.WriteLine(repo.Results.Count);
Assert.AreEqual("RSPH_Ponly_15_A_8May12_Earth_12-03-11", testResult1.DatasetName);
Assert.AreEqual(27926, testResult1.TargetID);
Assert.AreEqual(2, testResult1.ChargeState);
Assert.AreEqual(3741, testResult1.ScanLC);
Assert.AreEqual(3737, testResult1.ScanLCStart);
Assert.AreEqual(3756, testResult1.ScanLCEnd);
Assert.AreEqual(3730, testResult1.ScanN15);
Assert.AreEqual(3717, testResult1.ScanN15Start);
Assert.AreEqual(3736, testResult1.ScanN15End);
Assert.AreEqual(0.14264, (decimal)testResult1.NET);
Assert.AreEqual(0.1420909, (decimal)testResult1.NETN15);
Assert.AreEqual(3, testResult1.NumChromPeaksWithinTol);
Assert.AreEqual(2, testResult1.NumChromPeaksWithinTolN15);
Assert.AreEqual(808.43666m, (decimal)testResult1.MonoMass);
Assert.AreEqual(816.418341548027m, (decimal)testResult1.MonoMassN15);
Assert.AreEqual(15341980, (decimal)testResult1.Intensity);
Assert.AreEqual(339199, (decimal)testResult1.IntensityN15);
Assert.AreEqual(0.0025, (decimal)testResult1.FitScore);
Assert.AreEqual(0.6038309, (decimal)testResult1.FitScoreN15);
Assert.AreEqual(1.008051, (decimal)testResult1.RatioContributionN14);
Assert.AreEqual(1.089195, (decimal)testResult1.RatioContributionN15);
Assert.AreEqual(0.02444267m, (decimal)testResult1.Ratio);
//Dataset TargetID EmpiricalFormula ChargeState Scan ScanStart ScanEnd NumMSSummed NET NETError NumChromPeaksWithinTol NumQualityChromPeaksWithinTol MonoisotopicMass MonoisotopicMassCalibrated MassErrorInPPM MonoMZ IntensityRep FitScore IScore FailureType ErrorDescription ScanN15 ScanN15Start ScanN15End NETN15 ChromPeaksWithinTolN15 NumQualityChromPeaksWithinTolN15 MonoisotopicMassN15 MonoisotopicMassCalibratedN15 MonoMZN15 IntensityN15 FitScoreN15 IScoreN15 RatioContribN14 RatioContribN15 Ratio
//RSPH_Ponly_15_A_8May12_Earth_12-03-11 27926 C37H60N8O12 2 3741 3737 3756 5 0.14264 -0.004085 3 1 808.43666 808.43665 -4.47 405.2256 1.53E+07 0.0025 0 3730 3717 3736 0.1420909 2 2 816.4183415 816.4129617 409.2164473 339199 0.6038309 0.9496943 1.008051 1.089195 0.02444267
}
public void ImporterTest1()
{
var importedResultFile = Path.Combine(FileRefs.ImportedData, "N14N15TargetedResultsImportedData1.txt");
var importer = new N14N15TargetedResultFromTextImporter(importedResultFile);
var repo = importer.Import();
Assert.IsNotNull(repo);
Assert.IsTrue(repo.Results.Count > 0);
var testResult1 = (N14N15TargetedResultDTO)repo.Results[26];
Console.WriteLine(repo.Results.Count);
Assert.AreEqual("RSPH_PtoA_NL_14_rep3_8Jan08_Raptor_07-11-01", testResult1.DatasetName);
Assert.AreEqual(27926, testResult1.TargetID);
Assert.AreEqual(1, testResult1.ChargeState);
Assert.AreEqual(287, testResult1.ScanLC);
Assert.AreEqual(283, testResult1.ScanLCStart);
Assert.AreEqual(292, testResult1.ScanLCEnd);
Assert.AreEqual(286, testResult1.ScanN15);
Assert.AreEqual(282, testResult1.ScanN15Start);
Assert.AreEqual(291, testResult1.ScanN15End);
Assert.AreEqual(0.1390, (decimal)testResult1.NET);
Assert.AreEqual(0.1388, (decimal)testResult1.NETN15);
Assert.AreEqual(1, testResult1.NumChromPeaksWithinTol);
Assert.AreEqual(1, testResult1.NumChromPeaksWithinTolN15);
Assert.AreEqual(808.43894, (decimal)testResult1.MonoMass);
Assert.AreEqual(816.41637, (decimal)testResult1.MonoMassN15);
Assert.AreEqual(2185831, (decimal)testResult1.Intensity);
Assert.AreEqual(956636, (decimal)testResult1.IntensityN15);
Assert.AreEqual(0.062, (decimal)testResult1.FitScore);
Assert.AreEqual(0.102, (decimal)testResult1.FitScoreN15);
Assert.AreEqual(1.103, (decimal)testResult1.RatioContributionN14);
Assert.AreEqual(1.210, (decimal)testResult1.RatioContributionN15);
Assert.AreEqual(0.4255805m, (decimal)testResult1.Ratio);
//Dataset GrowthCondition GrowthTime BiolRepNum MTID Z Scan ScanStart ScanEnd ScanN15 ScanN15Start ScanN15End NET NETN15 ChromPeaksWithinTol ChromPeaksWithinTolN15 MonoMassIso1 MonoMassIso2 MZ1 MZ2 AbundanceIso1 AbundanceIso2 Iso1Fit Iso2Fit IScore1 IScore2 Iso1RatioContrib Iso2RatioContrib Ratio NumPeaksInCalc
//RSPH_PtoA_NL_14_rep3_8Jan08_Raptor_07-11-01 PToA_NL 180 2 27926 1 287 283 292 286 282 291 0.1390 0.1388 1 1 808.43894 816.41637 809.44622 817.42364 2185831 956636 0.062 0.102 0.000 0.000 1.103 1.210 0.425580533942721 0
}
