void OutputDomains(SequenceDesignContext context, PrettyPrintContext pp, Model m)
{
List<Domain> domains = new List<Domain>();
domains.AddRange(m.AllDomains().Distinct<Domain>(new ChemicalEqualitor<Domain>()).Where<Domain>(d => (d.Length > 0)));
domains.Sort((x,y) => x.FullDisplayName.CompareTo(y.FullDisplayName));
//
pp.NewLine();
string strDomainsCaption = context.Designer==null ? "Domains" : "Domains (nucleotides as in #1 below)";
string strDoaminsUnderline = new string('-', strDomainsCaption.Length);
pp.AppendLine(strDomainsCaption);
pp.AppendLine(strDoaminsUnderline);
pp.Indent();
//
AutoWidthTable formatter = new AutoWidthTable();
List<string> formats = new List<string>();
formatter.AddColumn(domains, d => d.FullDisplayName); formats.Add("{0}");
formatter.AddColumn(domains, d => d.Id); formats.Add(" id={0}");
formatter.AddColumn(domains, d => d.Length); formats.Add(" len={0}");
if (context.Designer != null)
{
formatter.AddColumn(domains, d =>
{
double tm = ThermodynamicsData.ComputeThermodynamics(context.Designer.ExperimentalConfiguration, d.Nucleotides, 0).MeltTempCelsius;
return tm > 0 ? $"{tm:F1}" : "n/a";
});
formats.Add(" Tm={0}");
}
formatter.AddColumn(domains, d => d.ChunkedNucleotides); formats.Add(" {0}");
formatter.FormatTo(pp, formats.ToArray());
//
pp.Outdent();
}
