public static XYData GetTestSpectrum(string xydataFileName)
{
Run run = new MSScanFromTextFileRun(xydataFileName);
var xydata = run.GetMassSpectrum(new ScanSet(1), 0, 50000);
return(xydata);
}
public XYData GetSpectrumAMTTag23140708_Z3_Sum3()
{
Run run = new MSScanFromTextFileRun(N14N15TestingUtilities.MS_AMTTag23140708_z3_sum3);
var xydata = run.GetMassSpectrum(new ScanSet(1), 0, 50000);
return(xydata);
}
public static XYData LoadXYDataFromFile(string testChromatogramDataFile)
{
var tempRun = new MSScanFromTextFileRun(testChromatogramDataFile);
var xydata = tempRun.GetMassSpectrum(new ScanSet(0));
return(xydata);
}
public void readInTextFileContainingMultipleHeaderLinesTest1()
{
Run textfiledata = new MSScanFromTextFileRun(FileRefs.RawDataMSFiles.TextFileMS_multipleHeaderLines, '\t', 1, 2);
textfiledata.GetMassSpectrum(new DeconTools.Backend.Core.ScanSet(0), 200, 2000);
TestUtilities.DisplayXYValues(textfiledata.XYData);
}
public void test1()
{
var textfiledata = new MSScanFromTextFileRun(FileRefs.RawDataMSFiles.TextFileMS_std1);
var xydata = textfiledata.GetMassSpectrum(new DeconTools.Backend.Core.ScanSet(0), 0, 2000);
TestUtilities.DisplayXYValues(xydata);
Assert.AreEqual(2596, xydata.Xvalues.Length);
Assert.AreEqual(582.822204589844, Convert.ToDecimal(xydata.Xvalues[418]));
Assert.AreEqual(2984, xydata.Yvalues[418]);
Assert.AreEqual(1, textfiledata.GetNumMSScans());
}