/// <summary>
/// c'tor
/// </summary>
/// <param name="appManager"></param>
/// <param name="filePaths"></param>
public CmdFilterCompoundGroupsMFE(ProfinderLogic appManager) : base(appManager)
{
m_psetFilters = m_AppManager[QualDAMethod.ParamKeyCpdGroupFilters] as IPSetCpdGroupFilters;
var psetFileList = m_PFLogic[QualInMemoryMethod.ParamDataFileList] as PSetDataFileList;
m_sampleGroupDict = psetFileList.SelectedFileName.ToDictionary(
fs => fs.FileName,
fs => string.Join(":", fs.SampleGroups));
}
public void UpdateInputDefaults(MFEInputParameters allParameters)
{
AllInputsParameters = allParameters;
MassHunterProcessingPSet = AllInputsParameters.AllParameters[MFEPSetKeys.MASS_HUNTER_PROCESSING] as IPSetMassHunterProcessing;
PeakFilterStatus = 8;
ChargeStateAssignmentPSet = AllInputsParameters.AllParameters[MFEPSetKeys.CHARGE_STATE_ASSIGNMENT] as IPSetChargeStateAssignment;
IsotopeTypeInd = 2;
AlignmentInfoPSet = AllInputsParameters.AllParameters[MFEPSetKeys.ALIGNMENT_INFO] as IPSetAlignmentInfo;
CPDGroupFiltersPset = AllInputsParameters.AllParameters[MFEPSetKeys.MFE_CPD_GROUP_FILTERS] as IPSetCpdGroupFilters;
}
